Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0301 ATGGAGAAGATCTGCGTCGCCGTTCGCCTCCGTCCTCTGGTGTCCGAAGACTCCTCCTCCGCCGCTGGAACCTTCTGGAAGGTCGAAGATAACCGCATATCTCTTCACAAGATCCACGGCACTCCTCTCTCTGCCTCTTCTCACGCTTTCGATCACATATTCGACGAAAGAAGCACCAATGCTAACGTTTACGAGCTCCTCGCCAAGGACATCATCCACGCCGCGCTCGATGGCTTCAACGGAACTGCATTTGCGTACGGGCAGACCAGTAGTGGCAAGACTTTCACCATGAATGGTTCTGAAACTGACGCGGGAGTGATTCCTCGGGCAGTTGGAGACATATTTGGGACAATTGAGACGATGTCTGATCGAGAGTTTCTGATACGAGTTTCGTATATGGAGATCTACAACGAAGAAATTAATGACCTTCTTGTTGTTGAAAATCAGAAATTGCAAATTCACGAGAGTTTGGAGCGTGGAGTATTTGTTTCAGGGCTGAAAGAGGAAATTGTAAATAATGCTGAACAAGTGCTGGATCTCATTAAAGCAGGGGAAGTTAACAGACATTTTGGTGAGACAAATATGAATGTAAGGAGTAGCAGATCGCATACAATATTTAGAATGGTGATTGAAAGCAAAGGGAAGGATTCCAATGATTGTTCAATTAATGATGTTGTTCGAGTTTCAGTCTTGAATTTAGTAGATCTAGCTGGTTCTGAAAGGATTGCCAAGACTGGAGCTGATGGAGTACGTTTAAAAGAAGGAAAATACATTAACAAGAGCTTGATGGTTTTGGGAAATGTTATCAACAAACTAAGTGAGGGTTCGAAACAAAGGGGGCATATCCCTTATCGTGATAGTAAATTAACTCGTATACTCCAACCTGCTCTTGGTGGTAATGCCAAAACGTCAATTATTTGCACTATAGCACCAGAAGAGATTCACATTGAAGAATCAAGGGGAACTCTTCAGTTTGCCAGTAGAGCCAAACGCATCACAAATTGCGTTCAAGTGAATGAGATATTGACGGATGCTGCCTTGTTAAAACGGCAACAATTAGAGATAGAGGAACTGCGTAAGAAGCTTCAGGGATCCCATGCTGAGGTGCTCGAGCAACAGATTCTTAATCTCAGGAACGATTTGCTGAAGTATGAAATGGAGCGTGGGAAACTTGAAATGGAACTGCAAGAGGAGAGGAAATCACGTAATCAATGGATTAGGGAACGGATGAATTTTGATAATTCTACTACGAAATCTTTCTCAGACTGTGGGACGAACGACAGTCAGGGACCGGGATTTTTGAGGCACGGATTTATGGAAGAGTACAGTGATATTGGTAGTATATCTCAAGGAGATATTTTCAAATCTCCGAAGGCAGATCCCAGTGCTTTTGTAGTCAGACGATCAAAGTATTCAACGTTGCCAGATCAAAGCCCCCTTCCAGATGCTTTCTCTAACGTGGCTGATGAAGATATGTGGTTGAAAATGAACAACGGTTATGTTGCAGACCTTGATTCCCTTCAAACTACTCCTCCCACCAACAGAAAAGTTCAGTCATTCCCAACAATTGATACAACTCCTGGTTGTACTAGTGAAATTGAGAAGTATGAACAAGAGATTCAAGATTTGAGGAGACAACTAGAACTAGCTAAAGAAAGGATAAATGAACTCGAGAAGCATTCAAAGGAAGTGCCATCAAGCAAGCACTTAATGAGCGAAGCACCAAAACATCAACAAGAAACACAGCTAATTCATGAATTGCCTCTGGGGTTATCTGAATCTGTAGGAAATTTCAAAGATGGCTTTGAGGAGGTTTTGTTGGCAATGCAGAGATGTGCATCGGGTGGCACACTATCGACTGAGAAGATACTTTCAACCGTGAGTGAAATTGGAGCTGATCTATTTGCAACTTTGGAAGGTCATTTTGCAGTGAATATGGGTAGTCAAAGGTCTTCCACTGGAAACTGTACTGTAATCAATGGACAACAAAAAATGTTTCGCGAGAGGATTGACAATATAATTACATCACTGGAGTTATGGAAAAGCTCAATAACAGAAGGACAGGAGAAGAAACAGTGTGAACACAAGGGCTCTGATTTGGGAGGTGAAACTGCTTACTCAAAGGAGGATTTATGTGAAAGATATGAAAGCATGGAAAGGGAGTTACAGCTTTTGAAGGTCGAAAGAGAGTCTTTGCTGCAAAAGTTCTCTGAATCATCTGAGAAACTATCAGTGGTTTCCAGCCAAAAAGAAAATGTTTTGAAAGATTTAAATACTGAAGTGCTGAGAAGGAAAAATCTAGAAGGGGAAGTTAAGCAGTTTGCTGCAGCTTTTGCTAGTCGTCAGGAATCACTCATTTCCTTTCATAGTGATCTTAAGACCAAAATTGAGAAATGGAGAACCCAGACTCCAATTTCAGTGCCCAAATCTTTTGGGTGA 2439 0.4198 MEKICVAVRLRPLVSEDSSSAAGTFWKVEDNRISLHKIHGTPLSASSHAFDHIFDERSTNANVYELLAKDIIHAALDGFNGTAFAYGQTSSGKTFTMNGSETDAGVIPRAVGDIFGTIETMSDREFLIRVSYMEIYNEEINDLLVVENQKLQIHESLERGVFVSGLKEEIVNNAEQVLDLIKAGEVNRHFGETNMNVRSSRSHTIFRMVIESKGKDSNDCSINDVVRVSVLNLVDLAGSERIAKTGADGVRLKEGKYINKSLMVLGNVINKLSEGSKQRGHIPYRDSKLTRILQPALGGNAKTSIICTIAPEEIHIEESRGTLQFASRAKRITNCVQVNEILTDAALLKRQQLEIEELRKKLQGSHAEVLEQQILNLRNDLLKYEMERGKLEMELQEERKSRNQWIRERMNFDNSTTKSFSDCGTNDSQGPGFLRHGFMEEYSDIGSISQGDIFKSPKADPSAFVVRRSKYSTLPDQSPLPDAFSNVADEDMWLKMNNGYVADLDSLQTTPPTNRKVQSFPTIDTTPGCTSEIEKYEQEIQDLRRQLELAKERINELEKHSKEVPSSKHLMSEAPKHQQETQLIHELPLGLSESVGNFKDGFEEVLLAMQRCASGGTLSTEKILSTVSEIGADLFATLEGHFAVNMGSQRSSTGNCTVINGQQKMFRERIDNIITSLELWKSSITEGQEKKQCEHKGSDLGGETAYSKEDLCERYESMERELQLLKVERESLLQKFSESSEKLSVVSSQKENVLKDLNTEVLRRKNLEGEVKQFAAAFASRQESLISFHSDLKTKIEKWRTQTPISVPKSFG* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0301 812 Coils Coil 708 735 - -
Pvu1g0301 812 ProSitePatterns Kinesin motor domain signature. 229 240 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu1g0301 812 Coils Coil 526 560 - -
Pvu1g0301 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 364 IPR027417 -
Pvu1g0301 812 Coils Coil 348 408 - -
Pvu1g0301 812 SMART kinesin_4 1 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 PANTHER CENTROMERE PROTEIN E 2 800 - -
Pvu1g0301 812 CDD KISc_CENP_E 3 332 - -
Pvu1g0301 812 Gene3D Kinesin motor domain 1 364 IPR036961 -
Pvu1g0301 812 ProSiteProfiles Kinesin motor domain profile. 3 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 PRINTS Kinesin heavy chain signature 193 210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 PRINTS Kinesin heavy chain signature 230 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 PRINTS Kinesin heavy chain signature 282 303 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 Pfam Kinesin motor domain 9 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g0301 812 PANTHER CENTROMERE PROTEIN E 2 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0301 Pvu-Chr1 2733745 2740908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0301 2 394 Miscellaneous Gene Families AT4G39050 44.332 3.05e-93 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0301 K11498 - gmx:100804944 1364.75