Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0300 ATGTTCTTCCACCAAGAACCCGAACCGGTTCACTCCTCCTGTTTCCCGGTTCTCCAAACCATGTTCACGCCCGCCGAAATAGAGGAGCTATTCTCCCTCGTTAACGAACCGCCGAGCCCGGAGTCCGGTTCGCAGGGCTCGAACCGCGCGGTCCGGTCCACGCACGAGAGAAAGCTGCGGCGAATGCAGTCGAACCGGGAGTCAGCCCGGCGGTCCCGCTGGAGAAAGAAGCGGCATTTGGAGAACCTCACGAACCAACAGAACCGGTTCAGAATGGAAAACCGAGAATTGAAAAACCGGTTATTCTTAACCATGCACCAGAATCTTCTTCTCTCCGTGGAGAATGAACGGCTTAGATCCGAATCCTTGACCCTTATGGCTACACTCTCAAACCTTTATCAAATTCTAGGCATTTCACAATAG 423 0.5319 MFFHQEPEPVHSSCFPVLQTMFTPAEIEELFSLVNEPPSPESGSQGSNRAVRSTHERKLRRMQSNRESARRSRWRKKRHLENLTNQQNRFRMENRELKNRLFLTMHQNLLLSVENERLRSESLTLMATLSNLYQILGISQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0300 140 MobiDBLite consensus disorder prediction 34 76 - -
Pvu1g0300 140 CDD bZIP_plant_GBF1 58 107 IPR045314 GO:0003700|GO:0006355
Pvu1g0300 140 MobiDBLite consensus disorder prediction 51 69 - -
Pvu1g0300 140 SUPERFAMILY Leucine zipper domain 57 109 IPR046347 GO:0003700|GO:0006355
Pvu1g0300 140 Coils Coil 52 72 - -
Pvu1g0300 140 Coils Coil 80 100 - -
Pvu1g0300 140 SMART brlzneu 53 117 IPR004827 GO:0003700|GO:0006355
Pvu1g0300 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Pvu1g0300 140 Gene3D - 55 108 - -
Pvu1g0300 140 PANTHER BZIP TRANSCRIPTION FACTOR 26 138 - -
Pvu1g0300 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 101 IPR004827 GO:0003700|GO:0006355
Pvu1g0300 140 Pfam bZIP transcription factor 57 101 IPR004827 GO:0003700|GO:0006355
Pvu1g0300 140 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0300 Pvu-Chr1 2722638 2723258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0300 3 140 bZIP Transcription Factor Family AT3G49760 36.486 2.71e-20 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu1g0300 bZIP_1 2.4e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0300 - - gmx:102668006 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0300 1 2722638 2723258 Pvu9g0758 9 12225452 12226507 PCT