Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0299 ATGGTGATGGGCAATTGGTGGTTAGGAAGAACAAGGGGTCGTTACTGTTACCACAGTGAGTTTCTGATCCGATGGATGACGAGCAGCAGGAGGGTCCAAGATAGGAGCCAGAAGAAAAGGGTTCACGACCTTGAAGTCGCAACCGAGAAATGGAAGATAGTCTCCAAAATCATTTACTTAATGGAGCTTTTGAAGCAGGAGCCCGAAATGGTTATTCCTGTTCGCTCCCTCGAAAACCACCGCAGGCAAATCAACCTCCCCAAGCCCCACCGAATCTCTGATTTCCTTCGCAAAACCCCCAAACTCTTTGAACTCCACAAGGACCAAAAGGGGGTCCTATGGTGCGGCATGACCCCAAAAGCCGAGGACTTGATGGAACAACAACAAAGGGTTATCGAGGACCATGCTGACAAGGCTGCAGAATACGTTACGAGGTTTCTCATGATGTCAGTGGAGAAACGTCTTCCCCTAGAAAAGATTGCTCACTTTAGAAGAGATTTTGGGTTGTCCTGGGATTTTAGAGTCGATTGGGTGCACAATTATCCTCAACATTTTAAGGTGGTGAAAACACTTGATGGGATTGAGTTTTTGGAGCTTGTGTCGTCAAATCCTGAATGGGCAATTACTGAGTTGGAGAAGAAGGTGGTGAGAGGAGTAACTGGAAGTGCAAGTGCAAGTGCAAGTGCAAGTGAATTACCTGGCGTGCTTTCAATTCCGTTCCCTTTGAAGTTTCCTTCAAATTATAAGAGGGTATATCGGTACTACGCTGAAAAGATTCAGCATTTTCAGGAGATGTCTTATTTGTCTCCCTATGCAGACGCCCGTGGACTTAAGGCTGGTTCTTTGGAGTTTGATAAAAGGGCCGTTGCTGTTATGCATGAACTGCTTAGTTTCACTATTGAGAAGAGGCTGGTCACTGATCACCTTACTCACTTTCGTTGGGAGCTTGTGATGCCTCAGAAGTTGATGAGGCTTCTGCTCAAGCATTGTGGGATCTTCTATGTGTCAGAGAGGGGGAAGAGGTTTAGTGTGTTTTTGACTGAGGCTTATGAGGGTTCTGAGCTCATTGAGAAATGTCCCTTGGTGCTGTGGAAGGAGAAGGTTCTAGGACTTGTGGGTTACAGAGGGAGGAAGAAGAAGTTTGAGGTTTGTAGTGAGGGGTCTGATATGGAGTGTGATGATAGTTTGGTTTTGGACCAGCATGATTCTGAAATGGGGGAGCTGCATGTGCAGATTGATCAAACTGGTACCTTGGATTACAAGGATCCTTTACTTTGGGATGATCTTGAGATGGATGTTGGAGAGATTGGCTGA 1314 0.4604 MVMGNWWLGRTRGRYCYHSEFLIRWMTSSRRVQDRSQKKRVHDLEVATEKWKIVSKIIYLMELLKQEPEMVIPVRSLENHRRQINLPKPHRISDFLRKTPKLFELHKDQKGVLWCGMTPKAEDLMEQQQRVIEDHADKAAEYVTRFLMMSVEKRLPLEKIAHFRRDFGLSWDFRVDWVHNYPQHFKVVKTLDGIEFLELVSSNPEWAITELEKKVVRGVTGSASASASASELPGVLSIPFPLKFPSNYKRVYRYYAEKIQHFQEMSYLSPYADARGLKAGSLEFDKRAVAVMHELLSFTIEKRLVTDHLTHFRWELVMPQKLMRLLLKHCGIFYVSERGKRFSVFLTEAYEGSELIEKCPLVLWKEKVLGLVGYRGRKKKFEVCSEGSDMECDDSLVLDQHDSEMGELHVQIDQTGTLDYKDPLLWDDLEMDVGEIG* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0299 437 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 26 435 IPR045040 GO:0003723
Pvu1g0299 437 PANTHER EXPRESSED PROTEIN 26 435 - -
Pvu1g0299 437 Pfam Plant organelle RNA recognition domain 39 375 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0299 Pvu-Chr1 2710435 2714806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0299 - - gmx:100817082 743.421