Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0295 ATGGTGGTGCTATCGTCGGAGGATGAATTCGACGAGGAGCCCGGCGAGGTCATCGAATCGGCGCCGCCGCAGAAGGTGGGCGAAGAGAGGCAACTCAGAGGTCTCAAGAAGAAGCTTCTCAGACACGGACACGGTTGGGAAACCCCCAACTTCAACGACGTCGTAACAGTTCATCGTGTTGGAACATTGCTCGATGGAACGGCGTTGGGTTCTTCCAATAGGACGGATCAACCCTTGACGTTCGCTCTTGGCAATGGTGACGTTCCTGGGTTGGACTGTGGGATTACGAGTATGAAGAAGGGGGAGGTAGCATTGTTCACATTACCTGCAGATGGTGAAGGTGATGTTTGGCGTGATTCCAACTCGGTTCTGCAGTTTGAGGTGGAACTCCTTTCGTGGATCAGAGTGGTGGATGTGTGCAAAGATGGTGGAGTTCTCAAGAAAATCATGGAGAAGGGGAGTGGGAATGACCGCCCTGCTGATCTCGATGAAGTGCTTGTGAAGTATCGGGTGGCACTAGTTGATGGCTCTGTTGTTGAAGAGACACCTGAAGGGGGAGTTGAGTTTCACGTGAAGGATGGTCATCTTTTTCCGATTTTGCCGAAAGTGATCATGACTATGACGAGGGGAGAGAAGGCTGAATTAATTGTCCAACCTCAGTATGCCTTTGGGGAGACTGGAAGAGAAGCTGGAAGTAGGCTCTGTTCTATCCCTCCAAATTCAGTACTGCATGTTAATATTGAATTGGTGTCCTTCAAGTCTGTCATAAATGTTACTGGTGACTCCAAGGTGCTTAAAAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAACGAGGGTGCAAAAGTTACGGTCAGCTTCACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGGAGAACTGAACAACCCTTGGAGTTCATAACTGATGAGGAACAAGTGATTGCTGGTCTAGATCGAGCTGTGGCAACTATGAAGAAGGGGGAGAGGGCCATTATTTCCATACATCCTGAGTATGCATTTGGAAATGTTGAAGTGAGACAAGATCTTGCTATTGTTCCACCAGGCTCGAATGTAGTCTATGACGTTGAGATGATGAATTTTATCAAGGAGAAAGCACCATGGGAATTGAATAATAAGGAGAAAATTGAGGTGGCTGAGAGGAAGAAAGAAGAAGGAAATGTACTATTTAAAGGTGACAATTACCTGCGAGCAGAGAAGAAGTATGAACAGGCGGTTGATTTTCTTAGTGACGATGGATCCTTTGGGTTTGGTGAGCAAAAGCAAGCTGACGCACTGAGAGTGTCATGCTGGTTGAATGGTGCAGCTTGTAGCCTTAAACTTAATGACTTTCGCGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAACGTGAAGGCTTTGTACAGACGAGCACAAGCATATATAGAAACTGGAGACTTCCTATTAGCAGATGTAGACATCAAGAAAGCTCTTGTGGTGGACCCTCAAAACTGGGAGGTAAAGGTAATTCAAAAGAAATTGAAACAACTTCAAGCTGACAAAGACAAAAAAGATGCTAAGCTGTTCAAAAACATATTTGCGCGTAAAACAAAGGACTCGTCTATGGCTATAAAGAGACTGAAGGTTGAGAAAGACGAGAGGGAAAATGAAGATGATGCAAGAATGGAAGAGGATATGGTTGCTGATAGCGTAGTGATTTAA 1722 0.4541 MVVLSSEDEFDEEPGEVIESAPPQKVGEERQLRGLKKKLLRHGHGWETPNFNDVVTVHRVGTLLDGTALGSSNRTDQPLTFALGNGDVPGLDCGITSMKKGEVALFTLPADGEGDVWRDSNSVLQFEVELLSWIRVVDVCKDGGVLKKIMEKGSGNDRPADLDEVLVKYRVALVDGSVVEETPEGGVEFHVKDGHLFPILPKVIMTMTRGEKAELIVQPQYAFGETGREAGSRLCSIPPNSVLHVNIELVSFKSVINVTGDSKVLKKILKEGEGAFTANEGAKVTVSFTAMLEDGTVFEKRRTEQPLEFITDEEQVIAGLDRAVATMKKGERAIISIHPEYAFGNVEVRQDLAIVPPGSNVVYDVEMMNFIKEKAPWELNNKEKIEVAERKKEEGNVLFKGDNYLRAEKKYEQAVDFLSDDGSFGFGEQKQADALRVSCWLNGAACSLKLNDFRGAIKLCSQVLDVEFCNVKALYRRAQAYIETGDFLLADVDIKKALVVDPQNWEVKVIQKKLKQLQADKDKKDAKLFKNIFARKTKDSSMAIKRLKVEKDERENEDDARMEEDMVADSVVI* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0295 573 Gene3D - 136 253 IPR046357 GO:0003755
Pvu1g0295 573 SMART tpr_5 437 470 IPR019734 GO:0005515
Pvu1g0295 573 SMART tpr_5 388 421 IPR019734 GO:0005515
Pvu1g0295 573 SMART tpr_5 471 504 IPR019734 GO:0005515
Pvu1g0295 573 Gene3D - 29 135 IPR046357 GO:0003755
Pvu1g0295 573 ProSiteProfiles TPR repeat profile. 471 504 IPR019734 GO:0005515
Pvu1g0295 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 260 - -
Pvu1g0295 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 370 555 - -
Pvu1g0295 573 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 264 371 - -
Pvu1g0295 573 SUPERFAMILY FKBP-like 138 253 - -
Pvu1g0295 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 159 250 IPR001179 GO:0003755
Pvu1g0295 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 131 IPR001179 GO:0003755
Pvu1g0295 573 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 277 367 IPR001179 GO:0003755
Pvu1g0295 573 SUPERFAMILY TPR-like 381 533 IPR011990 GO:0005515
Pvu1g0295 573 Gene3D Tetratricopeptide repeat domain 376 531 IPR011990 GO:0005515
Pvu1g0295 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 281 371 IPR001179 GO:0003755
Pvu1g0295 573 SUPERFAMILY FKBP-like 258 390 - -
Pvu1g0295 573 Gene3D - 254 375 IPR046357 GO:0003755
Pvu1g0295 573 SUPERFAMILY FKBP-like 8 135 - -
Pvu1g0295 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 162 253 IPR001179 GO:0003755
Pvu1g0295 573 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 134 IPR001179 GO:0003755
Pvu1g0295 573 PANTHER PEPTIDYLPROLYL ISOMERASE 5 260 - -
Pvu1g0295 573 PANTHER PEPTIDYLPROLYL ISOMERASE 264 371 - -
Pvu1g0295 573 PANTHER PEPTIDYLPROLYL ISOMERASE 370 555 - -
Pvu1g0295 573 Coils Coil 507 527 - -
Pvu1g0295 573 MobiDBLite consensus disorder prediction 553 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0295 Pvu-Chr1 2676927 2683567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0295 25 535 Calmodulin-binding Proteins AT3G25230 54.127 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0295 K09571 - gmx:100798382 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0295 1 2676927 2683567 Pvu1g0295 1 2676927 2683567 ECH