Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0294 ATGGTCGAAACCTACAGGGTAAGGTCCGTCGATTGGAGACCATCGCCGGTGGTGGCGCTAGCCACCACCATCGACGGCGCGCGAGTTGCTGCCGCTCGCCAGGATGGCTCCCTCGAAATCTGGCTTGTTTCTCCCGGCGCCATCGGTTGGCACTGTCAGCTGACTATTCACGGAAACCCTAACGGAAGAGTGACGTCGCTTATTTGGTGCCCTGGAGGAGTCGACGGAAGCCGTTTGTTTTCGTCCAACGTGGATGGCACGGTTTCTAGGTGGGATCTTTTCCATTTGAAGCAGGAGACGGTGCTGAAATCTGAAGTCTCAATCTGGCAAATGGCGATGAAGTTTCCTATAGATGATAAGGTGAATGATGAAAATAAGGCTGAACGGGTGGGGAAAGAAAATGGGAACGGTTTCCATGATTTTGTTGAACGTGAGAGCAGTGATAGTGATGATGATTCTCATTCGCCTGGTCCACTTGAGCATTCTTATAAGGAGCTCCCACGTGTGGCGATTGGTTTTAATGATGGAAGATTGAGAATCTATGAAATCACTGACACTGATGAATTTATTCTTGTAAAATCTTTGCCCCCCGTTTCAGGACGAGTTTTAAGTGTGACTTGGAGCGAAGATGCTAACTACATTTATTCGGGAAGCAGTGATGGTTTGATACGTTGCTGGAATGCTACATTGGGCAATGAAGTCTACAGGATTACAGCTGGACTTGGAGGGTTGGGCAGTGGACAGGAACTTTGCATATGGTCATTACTGTCGTTAAGGAATGGTACACTTGTCAGTGCGGACAGCAGTGGTAGTGTTCAGTTTTGGGACAGCCGACATGGAACTCTCTTGCAAGCACATTCTTTACATAAGGGACATGTATTTGCTCTGGCAGCAGCTCCTAGTCATAATAGGGTGTTTTCTGCTGGTTCTGATGGTCAGGTTATTCTTTACAAGCTTTCCGGTAGTCAGGCAGCATCAGCTGATGATATCAACTATTCTTCAATGACAAAGAGATGGATTTATATTCACCATGTAAGGTCTCATACACACGACATCAGGGCCCTTTCTGTCGCTGTACCCATAAGTTTTGAAGCTGATATTAACCCAGAAAAGAGGATTAAAAGAATTCGAGGAGGAAGGAAGCCCACAGATTTTAGTTACCATAAGTGGGCTCATTTGGGGGTTCCTATGCTTATCTCAGCAGGAGATGACACAAAACTTTTTGCATACCCAGTTAAAGAATTCACCATGTTTCCTCCTCATGACATCTGTCCTGCACCCCAGAGGACACCCACTCAACTAGTGCTCAACTCTATTTTCAATCAATCCAAAATCCTTTTAGTCCAATCATCAAAGCACATAGATGTTCATTTGCTACCGCATAAAAATGTTTCCAGCCCTGGTGGACTTACCAAGACCGAAATAGTTGCTCGAGTCAAGAGTAAGGCATCACGGAAGATAATTTGCAGCTCTATTTCTAATTCAGGGGCACTAATTGCGTACTCTGATCATAAAAGGCCTAGTCTTTTGGAATTGAAAAGGTGTGAAGTTGGAAAAATCACATGGGACGTTGATAGAAGGGAGCTTCCTCAGAGATTACCATTTGCCCACTCTATGGTTTTTTCTCATGACTCTTCCAAGTTGATAGTAGCAGGTTGCGACAGAAGGATATATGTTGTGGATATTGGGAAAGGTGAATTAGTACATACTTTTACACCCCGTCGTGAGCCTCAAGATGAGGAATTGCCTCCAACTGAGCCACCGATAACAAGATTGTTTTCTAGTTCTGATGGGCAATGGTTGGCAGCTGTGAACTGTTTTGGGGATATATATGTATTTAACTTGGAGATACAAAGCCAGCACTGGTTCATTTCAAGATTAGATGGCGCCTCTGTTACAGCTGGTGGATTTCCGCCCCAAAATGACAATGTTCTGATTGTTACAACTTCCTCAAATCAAGTCTATGCACTTGACGTAGAGGCGAAGCAGTTAGGAGAATGGTCAAAACGACATACTTTTGCTCTTCCTAGAAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTCCCTCCAGTAGAAGCTTCATCTTCTCCAACGGCAATATCATCTTCAGTTGTTGTTTACAGCTCCAGGGCAATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGATGAAGGTGATAACACTCAAGATTCGAGGGCTGGGAATTTCCAATATTTTAGTGTTACGAAGGGAACTAAACATAGTAAGAGGAAGTTTGAAGTTTTACCAATAGAGAAGCCTGTTAGGAGGAACTTTCAAGTTCTACCATTAGAGAATCCTGTTTTATTTTTAGCTCATACTTCAAAAAATTCCTTATTTATAGTAGACAAACCCTGGTTGCAAGTGGTCAAGAGTTTAGAAGCCCCACCAGTCCACAGACATATATATGGGACATGA 2448 0.44 MVETYRVRSVDWRPSPVVALATTIDGARVAAARQDGSLEIWLVSPGAIGWHCQLTIHGNPNGRVTSLIWCPGGVDGSRLFSSNVDGTVSRWDLFHLKQETVLKSEVSIWQMAMKFPIDDKVNDENKAERVGKENGNGFHDFVERESSDSDDDSHSPGPLEHSYKELPRVAIGFNDGRLRIYEITDTDEFILVKSLPPVSGRVLSVTWSEDANYIYSGSSDGLIRCWNATLGNEVYRITAGLGGLGSGQELCIWSLLSLRNGTLVSADSSGSVQFWDSRHGTLLQAHSLHKGHVFALAAAPSHNRVFSAGSDGQVILYKLSGSQAASADDINYSSMTKRWIYIHHVRSHTHDIRALSVAVPISFEADINPEKRIKRIRGGRKPTDFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTMFPPHDICPAPQRTPTQLVLNSIFNQSKILLVQSSKHIDVHLLPHKNVSSPGGLTKTEIVARVKSKASRKIICSSISNSGALIAYSDHKRPSLLELKRCEVGKITWDVDRRELPQRLPFAHSMVFSHDSSKLIVAGCDRRIYVVDIGKGELVHTFTPRREPQDEELPPTEPPITRLFSSSDGQWLAAVNCFGDIYVFNLEIQSQHWFISRLDGASVTAGGFPPQNDNVLIVTTSSNQVYALDVEAKQLGEWSKRHTFALPRRYQEFPGEVIGLSFPPVEASSSPTAISSSVVVYSSRAMCLIDFGLPVEQDEGDNTQDSRAGNFQYFSVTKGTKHSKRKFEVLPIEKPVRRNFQVLPLENPVLFLAHTSKNSLFIVDKPWLQVVKSLEAPPVHRHIYGT* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0294 815 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 236 IPR001680 GO:0005515
Pvu1g0294 815 Gene3D - 2 151 IPR015943 GO:0005515
Pvu1g0294 815 MobiDBLite consensus disorder prediction 127 161 - -
Pvu1g0294 815 SUPERFAMILY WD40 repeat-like 390 693 IPR036322 GO:0005515
Pvu1g0294 815 ProSiteProfiles Trp-Asp (WD) repeats profile. 286 327 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 188 227 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 3 42 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 564 614 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 526 561 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 279 318 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 49 92 IPR001680 GO:0005515
Pvu1g0294 815 SMART WD40_4 238 276 IPR001680 GO:0005515
Pvu1g0294 815 Gene3D - 470 677 IPR015943 GO:0005515
Pvu1g0294 815 Gene3D - 161 423 IPR015943 GO:0005515
Pvu1g0294 815 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 227 - -
Pvu1g0294 815 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 815 IPR044622 GO:0010073|GO:0035266
Pvu1g0294 815 Pfam WD domain, G-beta repeat 202 227 IPR001680 GO:0005515
Pvu1g0294 815 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 13 616 IPR011047 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0294 K14548 - gmx:100797494 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0294 1 2665958 2674392 Pvu1g0294 1 2665958 2674392 ECH