Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00397 ATGGCTTCTTCTTCTCCTCACTCTTTTCTTACACACCTTCCTCTTCATCCCTCCCACTCTCACCAAGGTGAGAAGCGCGTGGAGGACGATGAATCGCGCGTTCCGATTCACATCGTGACCGCGGCGTCTCAACTTCCCGTTGAATTTCTGGAGCCCTCGCCTCAATCGAAGCTCGTCGTCGGCTTTGACTGCGAGGGCGTTGACTTGTGTCGCAAAGGCACTCTCTGCGTAATGCAGCTTGCGTTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGAAGAGGAGCTTATCATAGCGTGTAAGCCTGCACTTGAGTCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGACAGTGAGGCATTGTACTTTCAGTTTGGCATCAAGTTGAACAATGTGGTGGATACCCAGATTGCTTATTCACTTATAGAGGAGCAAGAAGGACGAAAGAGATTGCGAGATGACTACATTTCATTTGTTGGCCTCCTTGCAGATCCACGTTATTGTGGCATATCATATGATGAGAAGGAAGAAGTTCGTGACCTCCTTCGACAGGACCCCAAGTTTTGGACACACAGACCATTATCTGAACAAATGGTCCGTGCTGCTGCTGATGATGTTCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAATTAAACGAGCGGTCTTTATGGTATCTTGCAGTTCGTGGTGCCTTGTACTGCCGATGTTTCTGTTTGAACAGTAACAATTTTGCTGATTGGCCATCTCTACCTCCAATTCCAGATAACCTGAATGCTGATGAAAGTGATCTTGAGGAAGAAATTCTTTCAGTTCTTGATGTTCCAGGAAAGATGGGACTTGTTATTGGGAAAAGAGGGGCGACAATTTTGTCAATTAAGCGGTCTTGCAATGCGGAAATTCTCACCGGAGGTCCCAAAGGCCCACCTGACAAGGTTGGTATATCAGCATCATGTGCCATGTGA 981 0.4628 MASSSPHSFLTHLPLHPSHSHQGEKRVEDDESRVPIHIVTAASQLPVEFLEPSPQSKLVVGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGEEELIIACKPALESNYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLRDDYISFVGLLADPRYCGISYDEKEEVRDLLRQDPKFWTHRPLSEQMVRAAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCLNSNNFADWPSLPPIPDNLNADESDLEEEILSVLDVPGKMGLVIGKRGATILSIKRSCNAEILTGGPKGPPDKVGISASCAM 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00397 326 Gene3D - 3 241 IPR036397 GO:0003676
Pumo9g00397 326 SUPERFAMILY Ribonuclease H-like 11 246 IPR012337 -
Pumo9g00397 326 CDD KH-I 277 323 - -
Pumo9g00397 326 Pfam 3'-5' exonuclease 53 224 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pumo9g00397 326 MobiDBLite consensus disorder prediction 1 29 - -
Pumo9g00397 326 SMART 35exoneu6 36 225 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pumo9g00397 326 CDD Egl_like_exo 49 244 - -
Pumo9g00397 326 PANTHER EGALITARIAN, ISOFORM B 30 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00397 Pumo-Chr9 6381489 6387171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00397 K18740 - gmx:100810098 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00397 9 6381489 6387171 Pumo9g00397 9 6381489 6387171 ECH