Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00396 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTCAAGGTTCCGGAAATCGAGCAGAAGGTGCTGGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTTCTGTGCTGGCAGAGATTGCTCAAGCTACCAAGAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGACTTGGTGAAACTGGAAAAGATTGGCGTTATGTATACAAGGCGTTAGCTGTTATAGAATATTTGGTAGCACATGGATCTGAACGTGCGGTTGATGACATTATAGAACATACTTTTCAGATCTCGGCACTTTCTAGTTTTGAATATGTTGAGCCTAGTGGGAAGGATGTGGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCGCTTTTGAATGATAGAGACAAGATACATGAAGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTATGTTGGAGTTTCTTCTAGTGGAATCACATACAAGTCTGGGTCAGCCGCCTCTTATGGTAGTGGCAGCAACTTTCAGAGCAGTGGTAAATATGGAGGCTTTGGATCTAGAGATGGTGACAGGTTTAGTGATAGCCATAGAGACAAGGGATCCTATGAAGAAGAAAAAGATTACCATGGAAAATCACACCATGCCACCACAGGTGACAATCAAGAGAACTCCTTCAAGAAGGGTTCTGCACGCTCTGTCAGCAAAAGTCAGGACAACAAGTCATCTAGAGTATCAAAGTCATCGACTAATGCAAATAATTATGGTTCAGTCCCTTCTCAAAGTTCAAGTGTACCTGCAAACAATACCGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAAAACTTCAGCCGGAAACTCTAACCAGGTTGATCTCTTTGGACAAGATTTAATCGGTGACCTCATGGATGCTCCAACATCTGTTCCTGTAGAAAAGCCTGCAACTAGTAATGTGCCAGAGGTTGATCTTTTTGCAGATGCAACATTTGTATCAGCAGAACCTCAAGTGGACAAAGGAGCCATTTCTCAACCACAGGCTGAGGTGGATCTATTTTCTTCACAACCAGCCATTCCTACAGTTACACCAACAGTTGACTTGTTTTCCATTCCAGAACCGGCAGTGCAGCCAGACAGCAAGTCAGAGAAGTCTGGTCCTATGAATAACGGCACTTTTGATCCCTTTGCTGCTGTTCCTCTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCTGTGTCTTCACAGCCCTCCAATAATGTTGTCAGTGATGACAAGCATGATAATATGACTGGTAAATCTTTAGCAGACTCTAAAGTTTCGCCTAAAAAGGATGCTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGCCGCGGACTGATTGATCTCAATATAACTGCTCCTAAAAAAGTATCCCTTGCGGATGTTGGAATTGTGGGCGGATTGAGCGGTGGATCCGACGAAAGGGAGAAAGGCCCTCCACCATCATTTTACATGGGGAGAGCTATGGGTCCAGGATCTGGTATTGGAATTGGAATTGGTAGGTCTGGATTCACTCCTTCACAGCCAGCAGCAGCTGGAGACGACATATTCTCAAACTTTAGCAACCAACAATATCAATTTGGTGGGTTCCAAAAGTAA 1704 0.4308 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSVLAEIAQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDRDKIHEVRNKAAANRDKYVGVSSSGITYKSGSAASYGSGSNFQSSGKYGGFGSRDGDRFSDSHRDKGSYEEEKDYHGKSHHATTGDNQENSFKKGSARSVSKSQDNKSSRVSKSSTNANNYGSVPSQSSSVPANNTEDDMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDLMDAPTSVPVEKPATSNVPEVDLFADATFVSAEPQVDKGAISQPQAEVDLFSSQPAIPTVTPTVDLFSIPEPAVQPDSKSEKSGPMNNGTFDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSNNVVSDDKHDNMTGKSLADSKVSPKKDAFQVKSGVWADSLSRGLIDLNITAPKKVSLADVGIVGGLSGGSDEREKGPPPSFYMGRAMGPGSGIGIGIGRSGFTPSQPAAAGDDIFSNFSNQQYQFGGFQK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00396 567 MobiDBLite consensus disorder prediction 427 458 - -
Pumo9g00396 567 PANTHER EPSIN/ENT-RELATED 4 532 - -
Pumo9g00396 567 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Pumo9g00396 567 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Pumo9g00396 567 MobiDBLite consensus disorder prediction 228 280 - -
Pumo9g00396 567 SMART enth_2 26 152 IPR013809 -
Pumo9g00396 567 MobiDBLite consensus disorder prediction 531 550 - -
Pumo9g00396 567 Pfam ENTH domain 27 147 IPR013809 -
Pumo9g00396 567 MobiDBLite consensus disorder prediction 198 227 - -
Pumo9g00396 567 FunFam Clathrin interactor 1 18 165 - -
Pumo9g00396 567 MobiDBLite consensus disorder prediction 192 304 - -
Pumo9g00396 567 Gene3D - 24 164 IPR008942 -
Pumo9g00396 567 CDD ENTH 28 144 - -
Pumo9g00396 567 MobiDBLite consensus disorder prediction 427 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00396 Pumo-Chr9 6373986 6380837 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00396 K12471 - gmx:100809198 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00396 9 6373986 6380837 Pumo9g00396 9 6373986 6380837 ECH