Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00393 ATGCTCCCAAAGAAGGTCCAAAACCCAGACAGCTACTATCATTGCCGCCTTTTCCTGGTCTACCCCTTGCCTGACAAGAGCTCAATAAGTGGTCCTGGACAGCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGGACATGGGGTTCTGTCATTGAATCCCATTTCAGGGAGGGTCTTGTGCAAATGGAGGACCTAGTTGCTGATGACTCTTCCACTCAGAAAGAAGATCTGATGAAACCTATGCGAAAGATTAGACCCAATGAAGTGATGAAACGTGGTGCCAGAGTTCATGTTCCTGTATCAATTGCTGAGACTAGAATTTCCAAAAGATATGATGCTATTCCAAGTGGAACACTATATCCAAATGCTGACGAAATTAAGTATCTGCAAAGGCTGGTGATTTACAAGGACTCAGCTATTATTGTGCTAAATAAACCTCCAAAATTGCCGGTTAAGGGGAGTTTGCCAGTTCATAATAGCATGGATGCTTTGGCAGCTGCGGCACTATCCTATGATTATGATGAGGGTCCTAAACTGGTTCACCGTCTTGACAGAGAGAGCAGTGGCATCCTTTTATTGGGGAGAACTAAAGATAGTGTATCTCATCTCCAATGGTTGTTCAGTAACATTAACAATGCAAAATCTTCTTGTAAGGCTTGGAATGATGCATGTGAAGCTACATATCAGAGGTATTGGGCATTAGTCATAGGGACTCCCAAGGAGAAGGAAGGCATAATTCATGCTCCTCTTGCTAAGGTGCTTCTAAATGATGGGAAGACTGAGAGGATAATACTAGCTCACCATTCGAGTGTAGAACCTCATCAAGAGGCTGTAACTGAGTATCGGGTGCTTGGTCCAAAGATAAATGGATGCACGTGGGTTGAGCTGCGTCCTCTTACTTACCGGAAGCATCAGTTGCGTGTCCATTGTGCTGAAGCACTTGGTACACCAATAGTGGGTGACTATAAGTATGGCTGGTTTGTGCACAGCCAATGGAAACAAATGCCGCGAGTCGATATTGAGCCAACAACTGGAAAACCATACAAGTTGCGGAGGCCAGAAGGCCTAGATGTTCAGAAGGGAAGTGTTTTATCAAAGGTTCCTCTATTGCATCTTCACTGCAGAGAACTTGTACTCCCCAACATTGCCAATTTTCTACATGTTTTGAACAAGACTTCAGAAGAACTACACACTTCACTTAGAGAGCAGCCTGATGTTCTTCGCTTTGTGGCAACAATGCCTTCACATATGAGAATTAGTTGGAATCTTATGTCTTCGTATTTAGTCTGA 1305 0.4345 MLPKKVQNPDSYYHCRLFLVYPLPDKSSISGPGQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEDLVADDSSTQKEDLMKPMRKIRPNEVMKRGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLAKVLLNDGKTERIILAHHSSVEPHQEAVTEYRVLGPKINGCTWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSQWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIANFLHVLNKTSEELHTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00393 434 Gene3D Pseudouridine synthase 128 392 - -
Pumo9g00393 434 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 39 429 - -
Pumo9g00393 434 Pfam RNA pseudouridylate synthase 145 316 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pumo9g00393 434 CDD PseudoU_synth_RluA_like 145 330 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pumo9g00393 434 SUPERFAMILY Pseudouridine synthase 130 387 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00393 Pumo-Chr9 6332893 6340089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00393 - - gmx:100817786 786.178