Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00370 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGGTGGTGGGTTCGGACAGTGGTGTTTTTGGTTCTTCTCTTGTTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGGGTGCTCAAGCAAGAGAGATCTGGCATAACAACTGAAGATGAGTGGAGAACTTCTAAAGTGCCCAAAACTGATGACATGTCTTCTGCCTCCAAAGCAATGCTCTTTCACCAAAGAAACTCTCTGCTGAGATCTAATGCAACTCTCTTTTCTGATGCTCATCACCAATCACAGATGTTGAGCTTCTCTTATCCAAAATCAGAGCCTTTGTTGGTGGACAAGGCTTCCTCAAATGCCACATTGCCTTTTTCTTACCACCAATTGTCTAGCTACAGCAGAAATGCAGGTTACAGTTCAGGAAGCATAAGCATGCATGGTGTGAGAGGGCCATTCACTCCATCACAGTGGATGGAGCTTGAACACCAGGCCTTGATCTACAAGTATATCACAGCAAACGTGGCTGTTCCAACTCATCTTCTCATACCCATCAGAAAAGCACTTGATTCTGTTGGCTTCTGCAACTTCACAACTGGACTCCTCAGACCCAACGCATTGGGATGGGGAAGTTTCCATCTTGGATTCTCGAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCAAGAGATGCTGTAGTAGATCAGAAGTATTGCGAGCGGCACATGAACCGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACCACCACTACTAATGCTTCCTCCAACTCCGTTGTGGTGCCCGGCAACAACAACACCTTTGCACACAACAATGTGCACCAGTCTCCAGCCAATACCATCAATAGGATGTTTACAAGCAACAAAGAGAATAACAGTACCAGTGAGAGGATGCAGGATGGCCCTGCACTTCCCATGCTGCCTCCCACTCTTGAGCTGAAACCAAAGGAGAACAACAACACTTTCATGATTCATAAACACCAAATCCCATCATATGATGAATCCTCAAGGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCCTTGCTTAACCCTTCAGAGAAAAGAAGCTTTGGTTCTTCTTCACAAAAGAATGATTCTGAGTCCCAACAACACTCTCTCAGGCATTTCATTGATGACTCACCCAAACCGCAGTCTCACCATCATCATCGTTCTTCTGTTTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCAATCTCCATACCAATATCTTCCTCAGACTTCATGTCATTCACTGCTTCCTCACCCTCCAATGAGAAACTCACATTGTCACCACTGAGGCTTTCAAGGGAGTTAGACTTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAGTGCCACCAATGAATCAAACACAAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCAATGGGTGGTCCTCTTGGAGAGGTTTTGAACCTTAGCAGTAGTAACAATAACAGCAACACAAGTGATCAATGTTGCAAGAACAACAACAACAACACTTCATCAGCTCTCAACCTCATGATGAAAGATGGATGGGACAATAGTCCTCCAGTAGGGTCCTCCCCAACTGGGGTGTTGCAAAAAACAGCATTTGGATCACTTTCTAACAGCAGTGCTGGGAGCAGTCCAAGGGGGGCAGAGAACAACAAAGAATAG 1740 0.4649 MDLGVVGLEGVVGSDSGVFGSSLVSDPETKHKWYGSGVLKQERSGITTEDEWRTSKVPKTDDMSSASKAMLFHQRNSLLRSNATLFSDAHHQSQMLSFSYPKSEPLLVDKASSNATLPFSYHQLSSYSRNAGYSSGSISMHGVRGPFTPSQWMELEHQALIYKYITANVAVPTHLLIPIRKALDSVGFCNFTTGLLRPNALGWGSFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTNASSNSVVVPGNNNTFAHNNVHQSPANTINRMFTSNKENNSTSERMQDGPALPMLPPTLELKPKENNNTFMIHKHQIPSYDESSRNNNEFGLVTSDSLLNPSEKRSFGSSSQKNDSESQQHSLRHFIDDSPKPQSHHHHRSSVWPELDNMQSDRTQLSISIPISSSDFMSFTASSPSNEKLTLSPLRLSRELDLDPIQMGLGVGSATNESNTRQANWIPITWESSMGGPLGEVLNLSSSNNNSNTSDQCCKNNNNNTSSALNLMMKDGWDNSPPVGSSPTGVLQKTAFGSLSNSSAGSSPRGAENNKE 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00370 579 MobiDBLite consensus disorder prediction 352 388 - -
Pumo9g00370 579 MobiDBLite consensus disorder prediction 247 277 - -
Pumo9g00370 579 ProSiteProfiles QLQ domain profile. 146 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo9g00370 579 MobiDBLite consensus disorder prediction 502 579 - -
Pumo9g00370 579 ProSiteProfiles WRC domain profile. 215 259 IPR014977 -
Pumo9g00370 579 MobiDBLite consensus disorder prediction 389 415 - -
Pumo9g00370 579 MobiDBLite consensus disorder prediction 544 579 - -
Pumo9g00370 579 Pfam WRC 216 258 IPR014977 -
Pumo9g00370 579 PANTHER GROWTH-REGULATING FACTOR 5 90 445 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pumo9g00370 579 MobiDBLite consensus disorder prediction 348 420 - -
Pumo9g00370 579 Pfam QLQ 146 180 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo9g00370 579 SMART QLQ_2 145 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo9g00370 579 MobiDBLite consensus disorder prediction 310 334 - -
Pumo9g00370 579 MobiDBLite consensus disorder prediction 260 277 - -
Pumo9g00370 579 MobiDBLite consensus disorder prediction 502 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00370 Pumo-Chr9 5741953 5757745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00370 1 560 GRF Transcription Factor Family AT2G22840 41.345 3.26e-107 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pumo9g00370 WRC 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00370 - - gmx:100818860 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00370 9 5741953 5757745 Pumo9g00370 9 5741953 5757745 ECH