Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00367 ATGCAGTCAGAAACAAGTGATACATCCAATGCTGTTGTCTCCTCCGCAACAACATCAACAGCAGCTAACGCAGCTAGCTTGAACACTTCTGTGGCATCAAATGGGCTTGCTTCCAGCCCATCTTCTGTCACACCAATTGCAGCAACTGATTCTCAACAGTTGGTTTCTGGATTATCTGGGACCTCTGTTTCCCACTCTGTAGTTACCTCAAGCACCACAGGAGTTGAACCAAGCACTGTGATTACTACGAGCGCTGCACCTACAGTAGTTGCAGGAAGCTCTGCACTAGCCGACAATTCACCTCAACAATCCAAAATGCCAACCATTGTTGAAAATCAAGCATCTCAAGATTTTGCTTCTGTAAATGGATCTTCTCTTCAAGATATCGAGGAAGCCAAAAGAACATTGCCTGTGGTTGGAAAAAATGTGATTCCACCTGAGGAGAAAACCAATGACGATGAAACCTTGGTATATGCAAATAAGCTGGAAGCAAAAAATGCATTTAAAGCGCTTTTGGAATCTGTAAATGTTCAGTCTGATTGGACATGGGAACAGGCAATGAGAGAAATCATCAATGACAAAAGATATAATGCCCTAAAAACACTTGGTGAGCGAAAACAAGCTTTTAATGAGTATTTGGGTCAAAGGAAGAAGCTGGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAAAGCCCGTGAAGAATTCACAAAGATGTTGGAAGAGTGCAAGGAACTTACATCATCCATGAGGTGGAGCAAAGCTATTAGTATGTTTGAAAATGATGAACGATTCAACGCTGTTGAAAGACCAAGAGACCGAGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGGAAGGAAAAGGAAAATGCTGCAGAGGAACACCGGCGGAATATAGCAGAATATAGAAAATTTCTGGAGTCCTGTGATTATGTGAAGGTGAATAGTCATTGGCGAAAAATCCAAGATCGGTTAGAGGATGATGATAGATACTTGCGACTTGAAAAAATTGACCGCTTGCTAGTTTTCCAGGACTATATTCGGGACTTGGAGAAAGAAGAAGAGGAACAAAAAAGAATACAGAAGGAACGAATTCGTCGGGGTGAACGGAAAAACCGTGATGCATTTCGCAAGTTGCTTGAAGAACATGTTGCTGCTGGAATTCTTACTGCTAAAACTCAATGGCGAGAATATTGCTCGAAGGTCAGGGATTTACCTCAATATCAAGCTGTTGCATCAAATACATCTGGTTCCACTCCAAAAGATTTGTTTGAGGATATTGCAGAGGATCTTGAAAAACAGTATCATGAAGACAAAACGCTCATAAAAGATACAATTAAGTCAGGCAAGATCATTGTAGTGACTACATCGGTATTTGAGGAGTTTAAGGTTGCTGTCTTGGAAGAAGCTGCATGCCAAACAATATCCGAGATCAATTTGAAGCTTATATTCGAAGAGTTGTTAGAGAGAGCTAAGGAGAAGGAGGAGAAAGAAGCCAAGAAGCGCCAACGCCTTGCTGATGACTTTACTAACCTGTTATATACATTCAAGGATATTAGTACTTCCTCAAAATGGGAGGATTGCAAGCCACTTTTTGAGGAGACTCAAGAGTACAGGTCAATTGGGGACGAAAGCTATAGTAAAGAAATATTTGAGGAATACATCACATACTTGAAGGAAAAGGCTAAAGAGAAGGAACGCAAGCGTGAAGAGGAAAAGGCCAAAAAGGAGAAAGAAAGAGAAGAGAAAGAGAAACGGAAGGAGAAAGAAAAGGATAAAAAAGAAAAGGATAGAGAACGTGAAAAAGATAAGTCTAAGGAACGTCATAGGAAGGATGAAACAGATAGTGATAATCAAGACATAGCTGACGGCCATGGTTACAAAGAGGAGAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAAAGGCACCAGATAGATGATGTGGATTCTGAAAAGGAAGAGAAGGAAGAATCTAAAAAATCACGAAGGCATGGCAGTGAACGCAAGAAGTCTCGGAAGCATGCAAACTCTCCTGAATCGGACAATGAAAACCGGCATAGGAGACACAAGAGGGAGCACTGGGATGGTTCCAGGAAAACTGGGGGGCTTGAGGAACTCGAAGACGGGGAGCTCGGGGATGATGTTGAGAACTAG 2163 0.4166 MQSETSDTSNAVVSSATTSTAANAASLNTSVASNGLASSPSSVTPIAATDSQQLVSGLSGTSVSHSVVTSSTTGVEPSTVITTSAAPTVVAGSSALADNSPQQSKMPTIVENQASQDFASVNGSSLQDIEEAKRTLPVVGKNVIPPEEKTNDDETLVYANKLEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKKAREEFTKMLEECKELTSSMRWSKAISMFENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRRNIAEYRKFLESCDYVKVNSHWRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQKRIQKERIRRGERKNRDAFRKLLEEHVAAGILTAKTQWREYCSKVRDLPQYQAVASNTSGSTPKDLFEDIAEDLEKQYHEDKTLIKDTIKSGKIIVVTTSVFEEFKVAVLEEAACQTISEINLKLIFEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDISTSSKWEDCKPLFEETQEYRSIGDESYSKEIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKDKKEKDREREKDKSKERHRKDETDSDNQDIADGHGYKEEKKKEKDKERKHRKRHQIDDVDSEKEEKEESKKSRRHGSERKKSRKHANSPESDNENRHRRHKREHWDGSRKTGGLEELEDGELGDDVEN 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00367 720 Coils Coil 277 306 - -
Pumo9g00367 720 MobiDBLite consensus disorder prediction 1 20 - -
Pumo9g00367 720 FunFam Pre-mRNA-processing protein 40A 497 570 - -
Pumo9g00367 720 Coils Coil 344 372 - -
Pumo9g00367 720 Pfam FF domain 163 212 IPR002713 -
Pumo9g00367 720 Pfam FF domain 230 280 IPR002713 -
Pumo9g00367 720 Pfam FF domain 372 427 IPR002713 -
Pumo9g00367 720 Pfam FF domain 299 347 IPR002713 -
Pumo9g00367 720 Pfam FF domain 508 555 IPR002713 -
Pumo9g00367 720 ProSiteProfiles FF domain profile. 368 431 IPR002713 -
Pumo9g00367 720 Coils Coil 485 509 - -
Pumo9g00367 720 SUPERFAMILY FF domain 363 438 IPR036517 -
Pumo9g00367 720 SUPERFAMILY FF domain 288 357 IPR036517 -
Pumo9g00367 720 SMART FF_2 370 431 IPR002713 -
Pumo9g00367 720 SMART FF_2 296 350 IPR002713 -
Pumo9g00367 720 SMART FF_2 161 215 IPR002713 -
Pumo9g00367 720 SMART FF_2 228 283 IPR002713 -
Pumo9g00367 720 SMART FF_2 503 558 IPR002713 -
Pumo9g00367 720 Gene3D FF domain 292 359 IPR036517 -
Pumo9g00367 720 Gene3D FF domain 217 291 IPR036517 -
Pumo9g00367 720 Gene3D FF domain 360 441 IPR036517 -
Pumo9g00367 720 MobiDBLite consensus disorder prediction 55 76 - -
Pumo9g00367 720 Coils Coil 209 232 - -
Pumo9g00367 720 ProSiteProfiles FF domain profile. 161 215 IPR002713 -
Pumo9g00367 720 SUPERFAMILY FF domain 153 215 IPR036517 -
Pumo9g00367 720 ProSiteProfiles FF domain profile. 228 283 IPR002713 -
Pumo9g00367 720 ProSiteProfiles FF domain profile. 296 350 IPR002713 -
Pumo9g00367 720 SUPERFAMILY FF domain 504 565 IPR036517 -
Pumo9g00367 720 Gene3D FF domain 161 216 IPR036517 -
Pumo9g00367 720 FunFam pre-mRNA-processing protein 40A isoform X1 160 215 - -
Pumo9g00367 720 SUPERFAMILY FF domain 222 290 IPR036517 -
Pumo9g00367 720 MobiDBLite consensus disorder prediction 675 709 - -
Pumo9g00367 720 FunFam Pre-mRNA-processing protein 40A 217 290 - -
Pumo9g00367 720 Coils Coil 556 607 - -
Pumo9g00367 720 MobiDBLite consensus disorder prediction 566 666 - -
Pumo9g00367 720 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 69 505 IPR039726 GO:0045292
Pumo9g00367 720 MobiDBLite consensus disorder prediction 566 720 - -
Pumo9g00367 720 FunFam Pre-mRNA-processing protein 40A 291 359 - -
Pumo9g00367 720 FunFam Pre-mRNA-processing protein 40A 361 442 - -
Pumo9g00367 720 Gene3D FF domain 497 571 IPR036517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00367 Pumo-Chr9 5684635 5693408 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00367 K12821 - gmx:100806019 1044.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00367 9 5684635 5693408 Pumo9g00367 9 5684635 5693408 ECH