Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00363 ATGTTCTTCCACGAAGGCGAAGCGGTTCAGTCCTCATACTTCCCGGTTCTCGAAACCATGTTCACGCCAACTGAAATAGAGGAGCTATTTTCCCTCGTTAACGAACCGGCCAGCCCGGGGTCCGGTTCACAGGAGTCCGGTTCGCGGGGTTCGAACCGGGCGGTCCGGTCCACCCACGAGAGAAAGCTTAGGCGAATGCAGTCGAACCGCGAGTCAGCCCGGCGGTCCCGCTGGAAAAAGAAGCGCCATTTGGAGAACCTCACGAGCCAACTGAACCGGTTGAGAATCGAAAACCAAGAATATAAAAATCGATTATTCTTAACCATGCACCAGAATCTTCTACTCTCCGTGGAGAAAGAACGTCTTAGATCCGAATCCGTTACCCTTATGGCTAGACTCTCGGATCTTTATCAACTTTTAGGCACCATGATGATTTCACAATAG 444 0.5113 MFFHEGEAVQSSYFPVLETMFTPTEIEELFSLVNEPASPGSGSQESGSRGSNRAVRSTHERKLRRMQSNRESARRSRWKKKRHLENLTSQLNRLRIENQEYKNRLFLTMHQNLLLSVEKERLRSESVTLMARLSDLYQLLGTMMISQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00363 147 CDD bZIP_plant_GBF1 62 111 IPR045314 GO:0003700|GO:0006355
Pumo9g00363 147 Coils Coil 84 104 - -
Pumo9g00363 147 Gene3D - 59 140 - -
Pumo9g00363 147 MobiDBLite consensus disorder prediction 54 73 - -
Pumo9g00363 147 Coils Coil 56 76 - -
Pumo9g00363 147 SUPERFAMILY Leucine zipper domain 61 115 IPR046347 GO:0003700|GO:0006355
Pumo9g00363 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Pumo9g00363 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 105 IPR004827 GO:0003700|GO:0006355
Pumo9g00363 147 MobiDBLite consensus disorder prediction 36 53 - -
Pumo9g00363 147 MobiDBLite consensus disorder prediction 34 81 - -
Pumo9g00363 147 FunFam BZIP transcription factor 59 110 - -
Pumo9g00363 147 Pfam bZIP transcription factor 61 105 IPR004827 GO:0003700|GO:0006355
Pumo9g00363 147 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Pumo9g00363 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 39 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00363 Pumo-Chr9 5652711 5653857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00363 3 140 bZIP Transcription Factor Family AT3G49760 39.161 5.08e-22 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo9g00363 bZIP_1 9.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00363 - - gmx:102668006 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00363 9 5652711 5653857 Pumo10g00303 10 4149778 4150713 PCT