Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00303 ATGTTGTTCCACGAAGACGAAGCGGTCCAGTTCCCATGTTCTCCGGTTCACGAAACCATGCTGACCGAAAGCGAAATGGAAGACCTCTTTTCTCTCATTAACCAATCGAGAGACCCGTCCAGTCCGGGGTCCGGTTCTCAGGGGTCGAACCGGGCGGTTTACTCGCCAGAGGAACGAAAGCTGAGACGCATGCAATCGAACCGGGAATCGGCCAGAAGGTCCCGCTACCGAAAGAAGCAGCATATAGAGAACCTCACGAACCAACTGAACCGGTTAAGAATCCAAAACCGGTTACTCAAAAACCGACTCGCCTCCACCATGCACCAAAACCTCCTATTATCCCTACATAACGATCATCTTAAATTCGAATCCGTTGCCCTCATGGCCACTCTTTCGGATCTATGTGGGATTCTAGGCACATGCTTTCACAATAATATATATACCAACCAAGTAACAAAGCAATGA 465 0.4903 MLFHEDEAVQFPCSPVHETMLTESEMEDLFSLINQSRDPSSPGSGSQGSNRAVYSPEERKLRRMQSNRESARRSRYRKKQHIENLTNQLNRLRIQNRLLKNRLASTMHQNLLLSLHNDHLKFESVALMATLSDLCGILGTCFHNNIYTNQVTKQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00303 154 FunFam BZIP transcription factor 57 108 - -
Pumo10g00303 154 SUPERFAMILY Leucine zipper domain 59 113 IPR046347 GO:0003700|GO:0006355
Pumo10g00303 154 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Pumo10g00303 154 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 140 - -
Pumo10g00303 154 Coils Coil 75 109 - -
Pumo10g00303 154 MobiDBLite consensus disorder prediction 34 53 - -
Pumo10g00303 154 Pfam bZIP transcription factor 58 107 IPR004827 GO:0003700|GO:0006355
Pumo10g00303 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Pumo10g00303 154 MobiDBLite consensus disorder prediction 55 71 - -
Pumo10g00303 154 MobiDBLite consensus disorder prediction 34 77 - -
Pumo10g00303 154 CDD bZIP_plant_GBF1 60 109 IPR045314 GO:0003700|GO:0006355
Pumo10g00303 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 104 IPR004827 GO:0003700|GO:0006355
Pumo10g00303 154 Gene3D - 57 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00303 Pumo-Chr10 4149778 4150713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00303 15 138 bZIP Transcription Factor Family AT3G49760 35.878 2.67e-16 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo10g00303 bZIP_1 5.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00303 - - gmx:102661984 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00363 9 5652711 5653857 Pumo10g00303 10 4149778 4150713 PCT