Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00292 ATGAAGGAGGACGCGGACAAAGATAAAGGCAAAGACAATAGGATTTGGGGAGCTTTTCTCTTCGGCTTAATTGGCGCCACCGTCACTACCTTTGCGGTCGGTCAGCTGCGGAGGAGTGTTGAATGGTTCTATACTCAGCTATCGAGGACACAGTCGTCGTGGAAAGGAGAGAGTGGTGGTTCTTTCCGATCAGCTTTTCAGGAAGAGGCATGGAGGAGGCACAATAAGCGAATGCAAGAGGAGTTAGAGGAGGAGATGGAAAGAGTGGAACGAATAAGGCGTATGCAAAGTGTGTTTAACAGAGAAAGGAATAAGTATAAAAGAAGCTATGAGAGCTGGAGGGAAAGTGGTCCTGGTGCATATCATCAGCATTTCCAAAGAGAAGATTGGTACTGGAAGGCTGATACATCCTTTAGAGACAAGAGGACTAATTATCGACAAACTCCAAGAGAGAGTGGAAACTATGCAATATCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAAAAACGCCATATTCAGATGCTGAGATTAAGACAGCATTTAGGACCAAGGCCAAGGAGTATCATCCTGATCAGAACCAGGATAATATAGTGGCTGCTGAGGCAAAGTTCAAGGAAGTGTTGACTTCATATGAGGCCATAAAACAGGAAAGAAGGAACCATCATCTGTAG 678 0.4469 MKEDADKDKGKDNRIWGAFLFGLIGATVTTFAVGQLRRSVEWFYTQLSRTQSSWKGESGGSFRSAFQEEAWRRHNKRMQEELEEEMERVERIRRMQSVFNRERNKYKRSYESWRESGPGAYHQHFQREDWYWKADTSFRDKRTNYRQTPRESGNYAISHHYSVLGLDRFRKTPYSDAEIKTAFRTKAKEYHPDQNQDNIVAAEAKFKEVLTSYEAIKQERRNHHL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00292 225 SUPERFAMILY Chaperone J-domain 158 221 IPR036869 -
Pumo10g00292 225 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 223 - -
Pumo10g00292 225 Coils Coil 68 95 - -
Pumo10g00292 225 SMART dnaj_3 158 221 IPR001623 -
Pumo10g00292 225 CDD DnaJ 160 214 IPR001623 -
Pumo10g00292 225 Pfam DnaJ domain 160 221 IPR001623 -
Pumo10g00292 225 PRINTS DnaJ domain signature 201 221 IPR001623 -
Pumo10g00292 225 PRINTS DnaJ domain signature 183 198 IPR001623 -
Pumo10g00292 225 Gene3D DnaJ domain 151 225 IPR036869 -
Pumo10g00292 225 ProSiteProfiles dnaJ domain profile. 159 221 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00292 Pumo-Chr10 3961590 3965504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00292 - - gmx:100812371 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00292 10 3961590 3965504 Pumo10g00292 10 3961590 3965504 ECH
Pumo9g00385 9 6135219 6139286 Pumo10g00292 10 3961590 3965504 PCT