Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01516 ATGGCGATGAAAGCAGTGTTGATCGGATGCAATTACCCAGGAACCAAGGCAGAGCTCCAAGGTTGCATCAATGATGTGTGGAGGATGCATAGATGTCTCATTGAACGCTATGGCTTCTCTGAGGAAGACATTATTGTTTTGATTGATACCGATGACTCCTACACCCAACCTACTGGCAAGAACATCCGGTTGGCTCTTGATCGCCTCATCCGATCCGCTAAGCCTGGGGATGTTCTCTTTGTTCACTACAGTGGCCACGGTACCCGACTTCCTGCTGAGACTGGCGAGGATGACGACACTGGATATGATGAGTGCATTGTCCCATGCGATATGAATCTCATAGAAGATGATGATTTCAAAGATCTTATAGATCAGGTGCCTCAGGGTTGTGTGATTACAATTGTTTCGGATTCATGTCACAGTGGTGGCCTCATTGAGGGTCAAGAAGAGCAGATAGGAGAGAGTACTAGAAGCAAAGCTCGTCACTCTGGATTTGGATTAAAAAATCTTCTGCGTAGTACTGTGGAAGGGACATTGCAATCTCGTGGAATCCATGTGCCTGCTGGATTGCGTCACCATGGACGGGATGAGTCTGATGAGAGAGAAGTTGAGATCACAAATGATGAGTATATTTATGTGAAAAACAGGACTCTTCCTCTATCCACTTTGGTGGAAATACTGAAGCAGAAAACTGGGAAGGAGGACATTGACGTTGGTAAGCTGAGACCCACACTATTCGATATGTTCGGTGAGGATTCAAGCCCGAAGATTAAGAAATTCATGAAGGTGATCTTAGACAAACTCAAACTCCATCATGGTGAAGGTGGAGAACACGGTGGATTTCTAGGAATAGTAGGAAGCCTAGCACAGGAGTTCCTGAAGCAGAAGCTGGATGAGCATAGTGAAGATTATGCCAAACCTGCCTTAAATACTTATGTGGGTAAAAAGGAAGAGGTGTATGCAGGATCATCTAGACGTGCCCTTCCCAGTAGTGGAATTTTGATCAGTGGCTGCCAGAGTAACCAAACTTCAGCGGATGCCAGCCCTTCTGGAAATGCTGATGAAGCTTATGGGGCTTTAAGCAATGCAATTCAGGAGATTCTAGCTGAGACAGATGGTTCCATTACATATCAAGAACTTGTTACGCAAGCTAGGAAGAAGCTGAAACGACAAGGCTTTTCTCAACGTCCTGGTCTATATTGCAGTGACTATCATCTGGATTCCCCATTTATATGCTGA 1239 0.452 MAMKAVLIGCNYPGTKAELQGCINDVWRMHRCLIERYGFSEEDIIVLIDTDDSYTQPTGKNIRLALDRLIRSAKPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLIEDDDFKDLIDQVPQGCVITIVSDSCHSGGLIEGQEEQIGESTRSKARHSGFGLKNLLRSTVEGTLQSRGIHVPAGLRHHGRDESDEREVEITNDEYIYVKNRTLPLSTLVEILKQKTGKEDIDVGKLRPTLFDMFGEDSSPKIKKFMKVILDKLKLHHGEGGEHGGFLGIVGSLAQEFLKQKLDEHSEDYAKPALNTYVGKKEEVYAGSSRRALPSSGILISGCQSNQTSADASPSGNADEAYGALSNAIQEILAETDGSITYQELVTQARKKLKRQGFSQRPGLYCSDYHLDSPFIC* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01516 412 Gene3D - 1 173 - -
Pte15g01516 412 Gene3D - 302 411 - -
Pte15g01516 412 PANTHER METACASPASE-4 3 404 - -
Pte15g01516 412 FunFam Metacaspase-4 302 410 - -
Pte15g01516 412 Pfam Caspase domain 4 403 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01516 Pte-Chr15 12441137 12442972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01516 - - rcu:8286221 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01516 15 12441137 12442972 Pte15g01516 15 12441137 12442972 RCT