Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00730 GTTTACTCTACTGTGGTTTTTCGCGGTCGTGTTGTGTGTTGTGTGTCGTGTGCTGCAACCCTCTTAAACCCTAACGCTTTGGTTTCGATTCAAAACGACAACAGAATTTCTGCTAACTCAGCCTGACCAATAGCTTCCACCCTGTGTTTCTATCTGCATCAGCTGAACATTTGAGTTAAATGGCCAATAACTCTCAGCCCTCCAGCATGCAGTTTCGGCCAGTCATGCAAGGTCAGCAAGGGCAACCATTTGTTTCAATGAATTCACAACAATTTGGACCTGCAGGACATGCTATTCCTTCTTCAAATGTAGGAATGACTGTCATTCAAGGTCAGCAAATGCAATATTCTCAACCAATGCAGCAGTTGACTCCAAGACCAATGCAGCACGGTCATCCTGCTCCTTCATCACAAGCTATACCTATGCCATATATTCAGACAAATAGGCCACTGACATCCATTCCACCACATTCACAGCAAACTGTTCCCCCCTTAAACAATCATATGCCTGGCTTGGCTGTTTCAGGAGCAGCTCCTCATTCTTCATATACTTTCACACCATCTTATGGTCAGCAGCAAGATAATGCAAATGCATTGGCTCAATACCAGCATCCACCTCAAATGCTTGCTCCTCCTGCTGGACAACCTTGGCCATCCTCTGCATCTCAGAGTGTTGCAGCTGCTACATCTGTTCAGCCGGCTGGGGTTCAATCATCTGGTACTACATCAACTGATGCGGCAACTAATGCTGCTAACCAACAATCGTTATCTGATTGGCAAGAACACACTTCTGCTGATGGGAGAAGATATTACTATAACAAGAGGACGAGACAATCAAGTTGGGAGAAACCTTTGGAATTGATGTCACCTATTGAGAGAGCTGATGCATCAACTGTTTGGAAAGAATTCACTTCTTCAGAAGGAAGAAAGTATTATTACAACAAGGTTACTCAGCAATCGACGTGGTCAATACCAGAGGAACTTAAGTTGGCTCGTGAGCAGGCACAGAAAGCTGCTGCTAACCAGGGAACGCAGTCAGAATCAAATGATACATCCAATGCTGTTGTCTCCTCCACAGCATCATCAATGGCAACTAATGCAGCTGGCATGAGCACTTCTTTGACATCGAATGGGCTTGCTTCCAGCCCATCTTCTGTCACACCAACTGCAGCAACTGATTCGCAACAGTTGGTTTCTGGAATATCTGCAGCCTCTGTTTCCCACTCTGTAGTTACCTCAAGCACCACAGGAGTTGAACCACACACTATGGCAACAACGAGTGCTGCACCTACAATGGTTGCAGTAAGTTCTGGATTAGCTGAGAATTCACCTCAACAATCTAAAATGCCACCAATTGTTGAAAATCAAGCATCTCAAGATTTTGTTTCTGTGAATGGATCTTCTCTTCAAGATATAGAGGAATCTAAAAGAGGATTGCCTGTGGTTGGAAAAAATAATGTGATTCCACCTGAGGATAAGACAAATGATGATGAAACCTTGGTGTATGCAAATAAGCTGGAAGCAAAAAATGCATTTAAAGCGCTTTTGGAATCTGTGAATGTTCAGTCTGATTGGACATGGGAACAGACAATGAGAGAAATCATCAGTGACAAAAGATATAACGCTCTAAAAACACTTGGCGAGCGAAAACAAGCTTTTAATGAGTATTTGGGTCAAAGGAAGAAGCTGGAGGCTGAAGAGAGGCGCATGAAGCAGAAAAGAGCCCGGGAAGAATTCACGAAGATGTTGGAAGAATGCAAGGAACTTACATCATCCATGAGATGGAGCAAAGCTATTAGTATGTTTGAAAATGATGAAAGATTCAACGCTGTTGAAAGACCAAGAGACCGAGAAGATTTATTTGAAAGCTACATGGTGGAACTTGAGAGGAAGGAAAAGGAAAATGCTGCAGAGGAACACCGGCGGAATGTAGCAGAATATAGAAAATTTCTGGAGTCCTGTGATTATGTGAAGGTGAATAGTCATTGGCGAAAAATCCAAGATCGGTTAGAGGATGATGATAGATACTTGCGACTTGAAAAAATTGACCGCTTGCTAGTTTTCCAGGACTGTATTCGGGATTTGGAGAAAGAAGAAGAAGAACAAAAAAGAATACAGAAGGATCGAATCCGTCGGGGTGAAAGGAAAAACCGCGATGCATTTCGCAAGTTGCTTGAAGAACATATTGCTGCTGGAATTCTTACTGCTAAATCTCAATGGCGAGAGTATTGCCTGAAGGTCAGGGATTTACCTCAATATCAAGCTGTTGCATCAAATTCATCTGGTTCCACTCCAAAAGATTTGTTTGAGGATGTTGCAGAGGATCTTGAAAAACAGTATCATGAAGATAAGACGCTCATAAAAGATACTATTAAGTCTGGCAAGATCAACGTAGTGACTACATCAGTATTTGAGGAGTTTAAAGATTCAGTCTTGGAAGAAGCTGGATGCCAAACAATTTCCGAGATCAATTTGAAGCTTATATTTGAAGAGTTGTTAGAGAGAGCTAAGGAAAAGGAGGAGAAAGAAGCCAAGAAGCGCCAACGCCTTGCTGATGACTTTACTAACCTGTTATATACATTCAAGGATATTACTATTTCCTCAAAATGGGAGGATTGTAAGTCACTTTTTGAGGAAACTCAAGAGTACAGGTCAATTGGGGAAGAAAGCTATAGTAGAGAAATTTTTGAGGAATACATCACATATTTGAAGGAAAAAGCTAAAGAGAAGGAACGCAAGCGAGAAGAGGAAAAGGCCAAAAAAGAGAAAGAAAGAGAAGAGAAAGAGAAACGAAAGGAGAAGGAGAAAAAAGATAAGGATAGAGAACGTGAAAAAGAAAAATCTAAGGATCGTCATAATAGGAAGGATGAAACAGATAGTGATAATCAAGACATAACTGACAGCCATGGTTACAAAGAGGAAAAGAAAAAAGAAAAGGATAAGGAAAGGAAACATCGGAAAAGGCATCAAAGCAGTATGGAGGATGTAGATTCTGAAAAGGAAGAGAAAGATGAATCTAAAAAATCACGAAGGCATGGTGGTGAACGGAAGAAGTCTAGGAAGCATGCAAACTCTCCTGAATCAGACAACGAAAACCGGCATAGAAGACACAAGAGGGAGCACTATGATGGTTCCAGAAAAACTGGAGGACTTGAGGAACTTGAAGACGGGGAGCTCGGGGATGATGTCGAGAACTAGTTGTTCTTTCCTAACCTTTTTGCAGTCATGAGATAAAAACTTAATCTGCATCTTTTGGAGAATATTGACTTAATTATGTACTCTTGTTACTTCTCTGGACACATCTGTGAATTTAGGATCTTCGAATGTAAAGAAATATTTTGGTTCTCGTTTTAGTTTTGACAATTTAATGACCGCTTAATTTGTACCATGAGTGCCGAGTACTGCAT 3406 0.4131 MANNSQPSSMQFRPVMQGQQGQPFVSMNSQQFGPAGHAIPSSNVGMTVIQGQQMQYSQPMQQLTPRPMQHGHPAPSSQAIPMPYIQTNRPLTSIPPHSQQTVPPLNNHMPGLAVSGAAPHSSYTFTPSYGQQQDNANALAQYQHPPQMLAPPAGQPWPSSASQSVAAATSVQPAGVQSSGTTSTDAATNAANQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSEGRKYYYNKVTQQSTWSIPEELKLAREQAQKAAANQGTQSESNDTSNAVVSSTASSMATNAAGMSTSLTSNGLASSPSSVTPTAATDSQQLVSGISAASVSHSVVTSSTTGVEPHTMATTSAAPTMVAVSSGLAENSPQQSKMPPIVENQASQDFVSVNGSSLQDIEESKRGLPVVGKNNVIPPEDKTNDDETLVYANKLEAKNAFKALLESVNVQSDWTWEQTMREIISDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAISMFENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRRNVAEYRKFLESCDYVKVNSHWRKIQDRLEDDDRYLRLEKIDRLLVFQDCIRDLEKEEEEQKRIQKDRIRRGERKNRDAFRKLLEEHIAAGILTAKSQWREYCLKVRDLPQYQAVASNSSGSTPKDLFEDVAEDLEKQYHEDKTLIKDTIKSGKINVVTTSVFEEFKDSVLEEAGCQTISEINLKLIFEELLERAKEKEEKEAKKRQRLADDFTNLLYTFKDITISSKWEDCKSLFEETQEYRSIGEESYSREIFEEYITYLKEKAKEKERKREEEKAKKEKEREEKEKRKEKEKKDKDREREKEKSKDRHNRKDETDSDNQDITDSHGYKEEKKKEKDKERKHRKRHQSSMEDVDSEKEEKDESKKSRRHGGERKKSRKHANSPESDNENRHRRHKREHYDGSRKTGGLEELEDGELGDDVEN 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00730 1005 Coils Coil 628 648 - -
Pste8g00730 1005 CDD WW 240 267 IPR001202 GO:0005515
Pste8g00730 1005 Pfam FF domain 447 496 IPR002713 -
Pste8g00730 1005 Pfam FF domain 514 564 IPR002713 -
Pste8g00730 1005 Pfam FF domain 656 711 IPR002713 -
Pste8g00730 1005 Pfam FF domain 584 630 IPR002713 -
Pste8g00730 1005 SUPERFAMILY FF domain 788 849 IPR036517 -
Pste8g00730 1005 ProSitePatterns WW/rsp5/WWP domain signature. 240 265 IPR001202 GO:0005515
Pste8g00730 1005 SMART FF_2 580 634 IPR002713 -
Pste8g00730 1005 SMART FF_2 512 567 IPR002713 -
Pste8g00730 1005 SMART FF_2 445 499 IPR002713 -
Pste8g00730 1005 SMART FF_2 787 842 IPR002713 -
Pste8g00730 1005 SMART FF_2 654 715 IPR002713 -
Pste8g00730 1005 MobiDBLite consensus disorder prediction 1 20 - -
Pste8g00730 1005 MobiDBLite consensus disorder prediction 927 951 - -
Pste8g00730 1005 SMART ww_5 235 267 IPR001202 GO:0005515
Pste8g00730 1005 SMART ww_5 194 226 IPR001202 GO:0005515
Pste8g00730 1005 Gene3D FF domain 445 500 IPR036517 -
Pste8g00730 1005 ProSiteProfiles FF domain profile. 652 715 IPR002713 -
Pste8g00730 1005 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 193 789 IPR039726 GO:0045292
Pste8g00730 1005 MobiDBLite consensus disorder prediction 277 298 - -
Pste8g00730 1005 SUPERFAMILY WW domain 198 232 IPR036020 GO:0005515
Pste8g00730 1005 ProSitePatterns WW/rsp5/WWP domain signature. 199 224 IPR001202 GO:0005515
Pste8g00730 1005 Gene3D FF domain 782 856 IPR036517 -
Pste8g00730 1005 ProSiteProfiles WW/rsp5/WWP domain profile. 234 267 IPR001202 GO:0005515
Pste8g00730 1005 MobiDBLite consensus disorder prediction 146 202 - -
Pste8g00730 1005 ProSiteProfiles FF domain profile. 580 634 IPR002713 -
Pste8g00730 1005 SUPERFAMILY FF domain 506 574 IPR036517 -
Pste8g00730 1005 Coils Coil 769 793 - -
Pste8g00730 1005 ProSiteProfiles WW/rsp5/WWP domain profile. 197 226 IPR001202 GO:0005515
Pste8g00730 1005 ProSiteProfiles FF domain profile. 445 499 IPR002713 -
Pste8g00730 1005 Coils Coil 561 590 - -
Pste8g00730 1005 Gene3D FF domain 645 725 IPR036517 -
Pste8g00730 1005 Gene3D FF domain 576 644 IPR036517 -
Pste8g00730 1005 Gene3D FF domain 501 575 IPR036517 -
Pste8g00730 1005 Gene3D - 192 235 - -
Pste8g00730 1005 Gene3D - 236 280 - -
Pste8g00730 1005 FunFam Pre-mRNA-processing protein 40A 781 854 - -
Pste8g00730 1005 FunFam Pre-mRNA-processing protein 40A 501 574 - -
Pste8g00730 1005 FunFam pre-mRNA-processing protein 40A isoform X1 444 499 - -
Pste8g00730 1005 Coils Coil 840 889 - -
Pste8g00730 1005 ProSiteProfiles FF domain profile. 512 567 IPR002713 -
Pste8g00730 1005 Pfam WW domain 240 265 IPR001202 GO:0005515
Pste8g00730 1005 Pfam WW domain 197 224 IPR001202 GO:0005515
Pste8g00730 1005 SUPERFAMILY FF domain 572 641 IPR036517 -
Pste8g00730 1005 MobiDBLite consensus disorder prediction 850 1005 - -
Pste8g00730 1005 SUPERFAMILY WW domain 227 268 IPR036020 GO:0005515
Pste8g00730 1005 MobiDBLite consensus disorder prediction 156 201 - -
Pste8g00730 1005 CDD WW 197 226 IPR001202 GO:0005515
Pste8g00730 1005 MobiDBLite consensus disorder prediction 850 920 - -
Pste8g00730 1005 MobiDBLite consensus disorder prediction 960 994 - -
Pste8g00730 1005 SUPERFAMILY FF domain 647 722 IPR036517 -
Pste8g00730 1005 Coils Coil 493 516 - -
Pste8g00730 1005 MobiDBLite consensus disorder prediction 273 298 - -
Pste8g00730 1005 SUPERFAMILY FF domain 437 499 IPR036517 -
Pste8g00730 1005 FunFam Pre-mRNA-processing protein 40A 645 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00730 Pste-Chr8 3807460 3820911 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00730 8 3807460 3820911 Pste8g00730 8 3807460 3820911 ECH