Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00710 ATCTTTGCCAAGACATCAACTCCCAAAAAAACAAAACCAGTCCGGTTTCCAGTTTTAGCTTAGCTTTAAGGTGTCAAGCATATCTTCTATTTCTACTTCATCCCTCTTCAACTCTCTCTGCTCTCTCTCTCTCTTTCCACCCACATGAGATGTGCCTTCCTTTTCCAAAGGGAGCAGCAACAACTTGTGTACTCTTCTTGTTGTTGTCCACTTCTCAGGAAGAGATGCCCCATCACTACCATTTCCCTTGCTTCTTCTTGATGCCAACTATCATTGTTGTCTAGTTCTTGCTGTGCTTTTTTCCTTTCTCCTTTTCTTGATGGATCTCGGGGTGGTTGGTTTGGAGGGGTTGGTGGGTTCAGACACTGCCGTCTTTGCTTCTGCTCTTGCTTCAGATCCTGAGACAAAGCACAAGTGGTACGGATCTGGAGTGCTCAAGCAAGAGAGATCTGGTGCCTCAAGTGAAGATGAGTGGAGAACCTCCAAAGTGCCTAAAACTGATGACATGTCTGCCGCTTCCAAAGCAATGCTGTTTCACCAAAGAAACTCTTTGCTGAGATCTAATGCTACTTTTTTTTCTGATACTCATCACCAGTCACAAATGTTGAGCTTTTCTTCCCCAAAATCAGAAACTTTTATGGTAGATAAGGCCTCCTCAAATGCTGCATTGCCCTTTCCCTACCACCAATTGTCTACTTACAGCAGAAACACAGGTTACGGTTCGGGAAGCATAAGCATGCATGGGGCCTTGGCCGGAGGACCATTCACTCCATCACAGTGGATGGAGCTTGAACATCAAGCATTGATCTACAAATACATCACATCAAACGTGCCTGTACCAACTCATCTTCTGATTCCAATAAAAAAAGCACTTGATTCTGCTGCCTTCTGCAACTTCTCAACTGGACTCCTAAGACCCAACCCATGTAAGTTATCAGTGGGATGGGGAGGGTTCCATCTAGGATTCTCAAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGATGCTCAAGAGATGCCGTTGTTGATCAAAAGTATTGCGAGCAGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACCACCACTCCTAATGCTTCCTCTAACTCCAATGTGGTCCCCTCCAACACCACCACCACCACCACCAACAACAACCCCTTTGCACACACCAATGTCACTCTGCACCACCCTCTTCCTCCTCATTCTTCCTCTCCATCCAACACCATCAACAGGATGTTTATGAGTAACAAAGAGAACAACGCGAGTGAGAGGATGCAGGATGGCCCTGCACTTCCCATGCTGCCTCCCACCCTTGAGCTGAAACCAAAGGAGAACAACCCTTTCATGATTAGCAAGCAGCAAATCCCATATGATGAATCTTCAAGGAACAACAATGAGTTTGGACTTGTCACTTCTGATTCCTTGCTTAACCCTTCACAGAAAAGAAGCTTTGGTTCTTCAGGAAAGGATGATTCTGAGTCCCAACAACAACATTCCCTCAGGCACTTCATGGATGAATCTCCGAAGCCACAGTCTCATCATCATCGTTCTTCTGTTTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCAATCTCCATTCCAGTATCTTCCTCAGACTTCATGAATTTCACTTCTTCCTCAACCTCCAACGAGAAACTGACATTGTCACCCCTGAGGCTATCAAGGGAGTTAGACTCCATTCAAATGGGGTTGGGAGTGGGAAGTGGTGCTCCCAATGAGTCAAATACTAGGCAAACCAATTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGACCTCTTGGGGAGGTTTTGAACCTTAGTAGTATTACTAACAACTGCACTGCAAGTGATCAAAGTGGAAAGAACACTTCTGCTCTCAACCTCATGAAAGATGGGTGGGACAACAGTCCTCCACTAGGGTCATCCCCAACTGGGGTGTTGCAAAAGACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGGAGCAGTCCAAGGGCAGAGAACAACAAAGAAGGTGCCACCTTGTGCAATGCCTTGTAA 2113 0.4638 MDLGVVGLEGLVGSDTAVFASALASDPETKHKWYGSGVLKQERSGASSEDEWRTSKVPKTDDMSAASKAMLFHQRNSLLRSNATFFSDTHHQSQMLSFSSPKSETFMVDKASSNAALPFPYHQLSTYSRNTGYGSGSISMHGALAGGPFTPSQWMELEHQALIYKYITSNVPVPTHLLIPIKKALDSAAFCNFSTGLLRPNPCKLSVGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCEQHMNRGRHRSRKPVEGQSGHALTTTTTPNASSNSNVVPSNTTTTTTNNNPFAHTNVTLHHPLPPHSSSPSNTINRMFMSNKENNASERMQDGPALPMLPPTLELKPKENNPFMISKQQIPYDESSRNNNEFGLVTSDSLLNPSQKRSFGSSGKDDSESQQQHSLRHFMDESPKPQSHHHRSSVWPELDNMQSDRTQLSISIPVSSSDFMNFTSSSTSNEKLTLSPLRLSRELDSIQMGLGVGSGAPNESNTRQTNWIPITWESSMGGPLGEVLNLSSITNNCTASDQSGKNTSALNLMKDGWDNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKEGATLCNAL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00710 597 MobiDBLite consensus disorder prediction 555 588 - -
Pste8g00710 597 Pfam WRC 222 264 IPR014977 -
Pste8g00710 597 MobiDBLite consensus disorder prediction 34 58 - -
Pste8g00710 597 MobiDBLite consensus disorder prediction 248 357 - -
Pste8g00710 597 MobiDBLite consensus disorder prediction 533 597 - -
Pste8g00710 597 MobiDBLite consensus disorder prediction 533 548 - -
Pste8g00710 597 MobiDBLite consensus disorder prediction 370 412 - -
Pste8g00710 597 PANTHER GROWTH-REGULATING FACTOR 5 88 462 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste8g00710 597 ProSiteProfiles WRC domain profile. 221 265 IPR014977 -
Pste8g00710 597 ProSiteProfiles QLQ domain profile. 148 183 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g00710 597 SMART QLQ_2 147 183 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g00710 597 MobiDBLite consensus disorder prediction 370 406 - -
Pste8g00710 597 Pfam QLQ 148 181 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste8g00710 597 MobiDBLite consensus disorder prediction 44 58 - -
Pste8g00710 597 MobiDBLite consensus disorder prediction 266 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00710 Pste-Chr8 3721156 3724723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00710 40 571 GRF Transcription Factor Family AT2G22840 42.451 3.17e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste8g00710 WRC 7.3e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00710 8 3721156 3724723 Pste8g00710 8 3721156 3724723 ECH