Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00693 TAATTAAGTTGAGAAAGATAAAAAAAAAAAAACAAGGAAAAGAAGCAAAGATGAAGTCCATGAATGATAGCAACACCGATGATGGGAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGATGTTACTTCTTCTGCTGGCCCTCCCCACCATCATCACTACTATCATCAGCCTCAGGCTTCTGCTGCTGCAGCGTGCAACACTGTTCCCACTAACTTCTATATGTCACCTTCACACCTCAACACCTCAGGAATCTGTTATGGGGTTGGAGAGAACAACGCCTTTCACTCTCCCTTGGCCATGATGCCTCTCAAGTCTGATGGGTCACTTTGCATTATGGAAGCTTTCAGCAGATCACAAACCCAAGTGATGGTGCCAACATCTTCTCCGAAACTTGAGGACTTCCTAGGTGGTGCAACTATGGGGAGCGACTATGGAGGGCATGAAAGAGAAGCAATGGCTCTAAGCCTAGACAGCATCTACTATAGTAACCAAAATGCTGAAGCTGAAACCAACAGAGACCATTCTTCTTCATTGGACCTTCTTTCTGACCCCTTCAGGCAACAGACCCATCCATATTACTCGGGGCTTGGGATTTACCAAGTGGAGGAAGAAGCTAAGGATCAACCCCACGTGGCAGGCTGCAGCTCCCAAATGCCTCAAGTGGTGGAAGAAAGCATTGCTTGTCTCAAAAACTGGGTGCCTCCAAGGGAATATTCTTCCACCCAGCAGAATCTGGAGCAGCATCAAGTGAATAGTAGTAGTGGCTTGGGGGAGGACCAAGGTGCTTCTAGGAATGTTAGTGTTGGAAGTGTGGGGTGTGGGGAGTTACAGTCTCTACGCTTGTCTATGAGCCCTGGTTCACAGTCTAGTTGTGTCACGGTTCCAACTCAGATCTCATCTTCTGGAACTGATTCAGTGGCAGTGGATGCCAAAAAGAGAGGGTCTGCTAAGCTAGGCCAGAAGCAACCTGTGCATAGGAAATCCATTGACACATTTGGGCAGAGAACTTCTCAGTATAGAGGTGTGACAAGGCATAGATGGACTGGTAGATATGAGGCGCATTTGTGGGATAACAGTTGCAAGAAGGAAGGGCAAACCAGGAAAGGAAGACAAGGTGGTTATGATATGGAAGAGAAAGCTGCAAGGGCTTATGATCTTGCGGCTCTCAAGTATTGGGGACCTTCAACTCACATAAACTTTCCGCTAGAAAATTACCAAACTGAACTGGAAGAAATGAAGAATATGAGCAGGCAGGAATATGTGGCCCACTTGAGAAGAAAGAGTAGTGGGTTTTCAAGGGGTGCCTCAATGTACAGAGGAGTGACAAGGCACCACCAACATGGTAGGTGGCAAGCAAGGATAGGCAGAGTTGCAGGAAATAAGGATCTTTATCTTGGGACATTCAGCACTCAAGAAGAAGCAGCCGAAGCATATGATGTAGCTGCAATCAAATTTCGTGGGGTGAATGCTGTCACCAACTTTGACATATCTAGATACGATGTTGAGAGGATCATGGCCAGCAACACCCTTCTTGCGGGAGAGCTGGCTAGAAGGAACAAGGAAAGTGAGCCAAGAACTGAGGCAATAGAGTACAATGTTGTGTCAAGCCAACAAGTCATAAGCAGGGAAGTAGAGGCTGTGAACAACAACGACAATAATGAAAATGTTTCATCAGATTGGAAGATGGGTCTGTATCATCAGCAACAGTCAAACAACTGTGACCAGAAAACCATGAAGTGTGGAAATTATAGAGGTCCTGCCTTCACTGTGTCCCTACAAGATCTCATTGGGATTGACTCAGTAGGATCTAGCCAGGCCATGATAGATGAGTCTACTAAGATAGGGACTCATTTTTCAAACCCTTCCTCGCTGGTCACCAGTTTAAGCAGCTCAAGGGAAGGTAGCCCTGATAAAACGGGCCCCACTTTGCTCTTTCCAAAGCCTCCAATGGGTTCAAAGATTGTTACTAGCCCTATTGCTAATGGTGTTGCTGTTGGCTCTTGGTTTCCCTCTCAAATGAGACCAGTGTCAATGTCTCACTTGCCAGTTTTTGCGGCTTGGAGTGATACC 2087 0.4633 MKSMNDSNTDDGNNHNWLGFSLSPHMKMDVTSSAGPPHHHHYYHQPQASAAAACNTVPTNFYMSPSHLNTSGICYGVGENNAFHSPLAMMPLKSDGSLCIMEAFSRSQTQVMVPTSSPKLEDFLGGATMGSDYGGHEREAMALSLDSIYYSNQNAEAETNRDHSSSLDLLSDPFRQQTHPYYSGLGIYQVEEEAKDQPHVAGCSSQMPQVVEESIACLKNWVPPREYSSTQQNLEQHQVNSSSGLGEDQGASRNVSVGSVGCGELQSLRLSMSPGSQSSCVTVPTQISSSGTDSVAVDAKKRGSAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKESEPRTEAIEYNVVSSQQVISREVEAVNNNDNNENVSSDWKMGLYHQQQSNNCDQKTMKCGNYRGPAFTVSLQDLIGIDSVGSSQAMIDESTKIGTHFSNPSSLVTSLSSSREGSPDKTGPTLLFPKPPMGSKIVTSPIANGVAVGSWFPSQMRPVSMSHLPVFAAWSDT 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00693 679 CDD AP2 425 486 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 Pfam AP2 domain 327 382 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 Pfam AP2 domain 427 476 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 MobiDBLite consensus disorder prediction 613 637 - -
Pste8g00693 679 FunFam AP2-like ethylene-responsive transcription factor 425 486 - -
Pste8g00693 679 FunFam AP2-like ethylene-responsive transcription factor ANT 326 392 - -
Pste8g00693 679 CDD AP2 326 390 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 ProSiteProfiles AP2/ERF domain profile. 426 484 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 SMART rav1_2 327 396 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 SMART rav1_2 426 490 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 PRINTS Ethylene responsive element binding protein signature 466 486 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 PRINTS Ethylene responsive element binding protein signature 328 339 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 113 554 - -
Pste8g00693 679 ProSiteProfiles AP2/ERF domain profile. 327 390 IPR001471 GO:0003700|GO:0006355
Pste8g00693 679 SUPERFAMILY DNA-binding domain 326 392 IPR016177 GO:0003677
Pste8g00693 679 MobiDBLite consensus disorder prediction 228 257 - -
Pste8g00693 679 Gene3D AP2/ERF domain 326 392 IPR036955 GO:0003700|GO:0006355
Pste8g00693 679 Gene3D AP2/ERF domain 426 486 IPR036955 GO:0003700|GO:0006355
Pste8g00693 679 SUPERFAMILY DNA-binding domain 425 486 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00693 Pste-Chr8 3636403 3640020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00693 1 511 AP2-EREBP Transcription Factor Family AT4G37750 51.371 1.33e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pste8g00693 AP2 4.7e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00693 8 3636403 3640020 Pste8g00693 8 3636403 3640020 ECH
Pste8g00693 8 3636403 3640020 Pste2g01214 2 13276451 13280202 PCT