Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00671 GAAACCGTTCGAAATTTCTCTGCCAGCGAGGCAGAGAGAGAAACTAGAGCCAGAGAGAAAGAGAGAGAGAGCAAACACAAACACATCCTCCTCCGTCGTCGCCGTCGTCGGTTCGCCGTCTCTTCTCCGATTTCTTTTCCGAAATGACGGATCCTTACTTGCTCGGTTGGATTCTGTGCTCCGTTCTGAGCCTCTTCGCGCTCTACAGCCTCTCCTTCGGTGGAGCCAGCCGGCGTCGCGCTTCGCCGAAGAAGAGGATTGAGTTATCCGAGACCGTGACGACATCTGCCGGAGAATGCAGATCGGAGAACCGCGACGGAGACACTGATGTCATCATTGTAGGAGCCGGTGTCGCCGGAGCCGCTCTCGCACACACTCTTGGCAAGGATGGGCGTCGAGTACACGTCATTGAAAGAGATCTGAGTGAGCCTGACCGAATTGTCGGAGAGTTGCTACAACCCGGAGGCTATCTCAAATTAATTGAGCTTGGACTGGAAGACTGTGTGGACGAAATTGATGCCCAGCAAGTGTTTGGTTATGCCCTTTTCAAGGATGGGAAACATACCCGCCTCTCTTATCCCTTGGAGAAGTTTCACTCCGATGTCTCTGGCAGAAGCTTTCACAACGGGCGCTTTATTCAGAGGATGCGGGAGAAGGCTGCCTCCCTTCCCAATGTACTATTGGAGCAAGGAACAGTCACTTCCCTAGTTGAAGAGAAGGGAACAATTAAAGGTGTGCAATATAAGAACAAAGATGGTGAGGTATTGACGACATATGCACCCCTTACTATTGTATGTGATGGCTGCTTCTCAAACTTACGCCGTTCTCTTTGTAATCCTAAGGTAGATGTTCCCTCATGTTTTGTTGGTTTAGTTTTAGAGAACTGTGAACTTCCATGCGCAAATCATGGCCATGTCATACTGGGAGATCCTTCGCCAATTCTATTCTATCCTATAAGTAGCACAGAGATTCGCTGCCTGGTCGATGTACCTGGTCAGAAGGTTCCTTCTATTTCAAACGGTGAAATGGAAAAGTATTTGAAAACAACGGTGGCTCCACAGATTCCCCCTGAACTTTATGATGCCTTCATTGCTGCTGTGGACAAAGGCAACATAAGGACAATGCCCAACAGAAGCATGCCAGCAGATCCTCTTCCTACACCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGGCATCCACTAACCGGGGGCGGAATGACTGTAGCATTGTCTGATATTGTGGTGCTTAGAAATCTTCTAAAGCCCCTGGCTGACCTAAATGATGCACCCACACTCTGCAAATACCTTGAGTCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACCATAAATACATTAGCAGGTGCTCTTTACAAAGTTTTTTGTGCATCCCCTGATCAGGCAAGGAAGGAAATGCGTCAAGCTTGCTTTGATTATCTGAGCCTTGGAGGGCTATTCTCTGAAGGACCAGTCTCTTTGCTTTCTGGATTAAACCCTCGTCCCTTAAGCTTGGTTCTCCATTTCTTTGCTGTTGCAATATTTGGTGTTGGCCGTTTATTGTTTCCATTTCCTTCACCGAAGCGAATATGGATTGGGGCCCGATTAATCTCTGGTGCATCTGCTATCATTCTGCCCATAATTAAGGCTGAAGGGATTCGGCAGATGTTTTTCCCTGCCACTGTTCCCGCCTATTACAGAGCTCCCCCGGTTGCACAATAGTGAGTATCAGTGAATACGTTTGGAAAAATCAAGGTGCTCTCAATAATATGAGCTAGGTTTTATCCCGCTTTTTTTTGTTTTCAGAATTTGAGGGAAGGTTGAAGTTCGTAGTTCTGTAAGCATTTTGGCTTCTTTAGTGTGTATTCTTTGTAGTCTGTAACTCATAATGTCAAGTGCATGTATGATCTCTCCTTGTCTCTCTCCCCCTTTTTGGTACCCTATAAATCAAATCCATTATCTTAAGCTGAATCAACGTCCACGCTGGCCACTTAAACTAAGACTAAGTGCAGCAGCTAATGAGTTTTTATACATATTCGATTTCTGAAGTATTTTTTGCATCAGAGCAAGTTTGTAAAACATCTAAAAATAATCCA 2098 0.4619 MTDPYLLGWILCSVLSLFALYSLSFGGASRRRASPKKRIELSETVTTSAGECRSENRDGDTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVDEIDAQQVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVLLEQGTVTSLVEEKGTIKGVQYKNKDGEVLTTYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCELPCANHGHVILGDPSPILFYPISSTEIRCLVDVPGQKVPSISNGEMEKYLKTTVAPQIPPELYDAFIAAVDKGNIRTMPNRSMPADPLPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLADLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIFGVGRLLFPFPSPKRIWIGARLISGASAIILPIIKAEGIRQMFFPATVPAYYRAPPVAQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00671 526 PANTHER SQUALENE MONOOXYGENASE 13 523 IPR040125 GO:0004506|GO:0016126
Pste8g00671 526 Pfam Squalene epoxidase 212 484 IPR013698 GO:0004506|GO:0016020|GO:0050660
Pste8g00671 526 SUPERFAMILY FAD/NAD(P)-binding domain 60 435 IPR036188 -
Pste8g00671 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Pste8g00671 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Pste8g00671 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Pste8g00671 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Pste8g00671 526 Gene3D - 54 436 IPR036188 -
Pste8g00671 526 FunFam Squalene monooxygenase 2 55 435 - -
Pste8g00671 526 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00671 Pste-Chr8 3494532 3499021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00671 43 526 Miscellaneous Gene Families AT1G58440 80.493 0.0 815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00671 8 3494532 3499021 Pste8g00671 8 3494532 3499021 ECH
Pste8g00671 8 3494532 3499021 Pste2g01217 2 13335650 13339799 PCT