Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03253 GCCGTTGGAAGCTAACACTGGATAACGTTTTCTCTCTGCATAGTGCACACTCTACCACTGACCAGTGAGCTCACATGCTTTAAGTTTGCCCTTCTTTCCAATGGCTTCTTCTATTCCTCTCCACACGTTATTCTCTGCCACCCAGTTCAAGGCTTCGCGCAGTGGCTTCTTGTGGCCACCCAGTTACTCGTTTGGCTCCCATACTCAAAACAGAGCACGAGCCATCAAAGCCTCGCTTGGTGCACCCCCGTTTCCCCTGTTTCAGCCTCCCCAAGTTGAAGAGTCATCCTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAAGATCGGTTATGTCCGAAGCATGCGAGCTTATGGAGTTCAGTTTAAAGAAGGGCCAGATGGTTTTGGTGTGTATGCCTCCAAAGATGTAGAGCCTCTTCGCCGAGCAAGGGTTGTAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAGCTCCCGTGGATGTTTTTCCCTGATATAATTCCCTTGGATCATCCAATTTTTGATATTATCAACTCAACAAATCCAGAGACAGATTGGGACCTAAGGTTAGCGTGCCTTCTCTTGTACTCATTTGACTGTGAAGGAAACTTTTGGCAATTGTATGGAGATTTCTTGCCGAGTGCAGATGAGTGCACTAGCTTGCTTCTAGCATCAGAGGAGGAACTTTTGGAGTTGCAGCATCCCAATCTTGCTTCCACTATTAGAAAACAGCAACAACGAGCCTTAGAATTCTGGGAGAGTAACTGGCACAGTGGTGCGCCTCTTAAAATTAAGCGTCTTGCACGTGATCCTCAAAGGTTCACTTGGGCTGTAAGTATTGCACAGTCACGATGTATTAACATGCAAACTAGAATTGGTGCTCTAAATCAAGAAGCCAATATGCTGATTCCTTATGCTGATATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAGCGCATTAGAAAGGGAGATGAGATGACAGTCAATTACATGAGTTCGCAGAAGAATGACTTATTCATGCAAAGATACGGGTTTTCATCACCTGTGAACCCTTGGGACGAAATTAAATTCTCAGGCAATGCACGTATTCATTTGGATTCTTTCTTGTCAATTTTCAATATATCTGGCCTTCCTGAAGAGTATTACCATAACGACTGTCTATCAAATGCGAGAGATACTTTTGTTGATGGAGCAGTCATAGCTGCAGCTCGAACATTGCCAACTTGGTCAGACAGGGATGTGCCTCCAATCCCTAGCATTGAAAGAAAGGCTGCGAAGGAGTTGCAAGATGAATGCCAAAAGATGCTTGCAGAATTTGCTACAACCTCTAAGCAAGATCAGAAACTGCTAGGTAAATTTGCATTCATATCCTTACACTAGAAACTAGATACACAGAACTGATTCTCATAATAATTTGTATTATTCAATAATTTGCTTTGTGATAATATATAAGTATATGTCGTCCTGAAAATGATTCATACAAGTCTGTTAACTTTTCTTTCATATCCCTAATACACATGGGTTTGTAAACATTTTGGGGATATTCTGGTTGACTTGGAGTCAGTCTATCAACATTGCCAAAACAATTTACTTTCTTAGTTAAGGCTACAACTCTACATGATTACAGTTGTATCTTCTACTTAAGCTTCATCAGTTCTGTGGAGATCTGGATCAATTGAACCTCCATTAACACCTTCAAGTTCACCGAATAGTACTTTTGTTGAGGATTTTATTTGAGTCTATTACAGAAATCCAATGGGCAAAAGGCTCAATCACTTGTGAGTGGGAGCTCTTCAAATTATCACCTAAGGTTTATAAAATAGTCATGTGATCCTTCCTCAAGGATGGACTCAATCTTGTAAACTAAAAGATCAAAATTTACCAAAAGCTCCAGGGTTGTGTGACTATTGTGGCTCTAGGTGAGATTTCATGATAAAAGCTAATTCTTAGCTTGCACATCATGATTGCAGATTCCATGACAGATGCTACGAGGACACTTGAAGCTTCAATAAAGTATAGATTGCACAGGAAATTGTTCATGGAGAAAATTATCCAAGCATTGGACATGTATCAAGAGCAAATACTGTTCTGATCCCAATCTACCAACAAAATAGTGAGGAAATTTTGTAACACTGCCGTGTATGCCTGCAATCCTGTGTCACTAAAAAATATGTTCGTTATCCATGAATTGCAGGTTCTTCATTCTGTTGTGCC 2278 0.4083 MASSIPLHTLFSATQFKASRSGFLWPPSYSFGSHTQNRARAIKASLGAPPFPLFQPPQVEESSSELEPADPDFYKIGYVRSMRAYGVQFKEGPDGFGVYASKDVEPLRRARVVMEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTNPETDWDLRLACLLLYSFDCEGNFWQLYGDFLPSADECTSLLLASEEELLELQHPNLASTIRKQQQRALEFWESNWHSGAPLKIKRLARDPQRFTWAVSIAQSRCINMQTRIGALNQEANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVNYMSSQKNDLFMQRYGFSSPVNPWDEIKFSGNARIHLDSFLSIFNISGLPEEYYHNDCLSNARDTFVDGAVIAAARTLPTWSDRDVPPIPSIERKAAKELQDECQKMLAEFATTSKQDQKLLGKFAFISLH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03253 447 CDD SET_LSMT 86 333 - -
Pste2g03253 447 ProSiteProfiles SET domain profile. 74 319 IPR001214 GO:0005515
Pste2g03253 447 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 330 440 IPR036464 -
Pste2g03253 447 SUPERFAMILY SET domain 94 334 IPR046341 -
Pste2g03253 447 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 63 438 - -
Pste2g03253 447 Coils Coil 413 433 - -
Pste2g03253 447 Pfam SET domain 95 318 IPR001214 GO:0005515
Pste2g03253 447 Gene3D set domain protein methyltransferase, domain 1 79 333 - -
Pste2g03253 447 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 79 333 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste2g03253 SET 4.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03253 2 32434193 32448347 Pste2g03253 2 32434193 32448347 ECH