Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01217 GTAAACTCGCAGCCTTTTCTTCGAATCCTCGCTGCGGCCAGCGAAGCAGAGAGAGAAACTAGAGCAAGAACACAGCATTGTCTTCTCCGTGCCAATGGTGGACCCCTACGTCCTCGGATGGATCATGTGCACCGTTCTCAGCCTCGTCGCGCTCCGCAATTTCCTTTTCGCGTCCAATAACCGATGCGCTTCATCGTCCGCTCTCTGCGCCCAAAACATCACCACCGCCGCCGGAGAATGCAGATCCACCAACTGCAGCGCCGACGTTGACGTCATCATTGTCGGAGCCGGCGTTGCCGGCTCCGCTCTCGCTCACACTCTCGGCAAGATCGAATTGTTGGAGAGTTGCTACAACCTGGAAGGCTATCTCAAATTAATTGAACTGGGACTTGAAGATTGTGTGGAGAAAATTGATGCTCAACAAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAACACACACGACTCTCTTATCCGTTGGAGAAGTTTCATTCAAATATTGCTGGCAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGAGAGAAGGCTGCCTCCCTTCCCAATGTACGGTTGGAGCAAGGAACAGTTACTTCCCTACTTGAAGAGAAGGGAGTAATTAAAGGTGTGCACTATAAAACGAAGGATAGTCAAGAATTTTCAGCTTGTGCACCTCTTACCATTGTCTGTGATGGCTGTTTCTCAAACTTGCGCCGTTCTCTTTGTAATCCTAAGGTGGATGTTCCCTCTTGTTTTGTTGGGTTGGTTTTGGAGAATTGTGAACTTCCTTGTGCAAATCATGGCCATGTCATATTAGGAGATCCTTCGCCAGTTCTGTTCTATCCTATAAGTAGTACAGAAATCCGCTGTCTAGTTGATGTTCCTGGTCAGAAGGTTCCATCTATTTCCAATGGTGAAATGGCAAAGTATTTGAAGACTGTGGTAGCTCCACAGGTTCCTTCTGACCTCCATGACGCATTCATAGCTGCAGTGGACAAAGGCAACATCAGGACAATGCCAAACAGAAGCATGCCAGCAGCTCCTTATCCTACTCCGGGAGCCCTGTTAATGGGAGATGCATTCAACATGCGCCATCCTCTAACAGGTGGTGGAATGACTGTGGCATTATCTGATATAGTAGTGCTGCGTAATCTTCTCAGGCCTTTGCGAGATCTGAATGATGCACCCAGCCTTTGCAAATACCTAGAATGCTTTTATACCTTGCGCAAGCCTGTGGCATCCACTATAAATACGTTGGCAGGAGCTCTTTACAGGGTTTTTTGCGCATCACCTGATCCAGCAAGGAAGGAAATGCGCCAAGCTTGCTTCGATTATCTTAGTCTTGGAGGTCTATTCTCGGAGGGGCCAGTCTCTCTGCTTTCAGGATTAAACCCTCGGCCATTGAGCCTGGTTCTCCATTTCTTTGCTGTTGCAATATATGGTGTTGGCCGTTTACTTCTACCATTTCCTTCTCCTAAACGGATATGGATTGGAGTCCGATTAATTTCTAGTGCTTCTGGAATAATCTTGCCAATAATTAAGGCAGAAGGCGTCCGTCAGATGTTCTTCCCTGCAACCGTTCCAGCTTACTACAGAAATCCCCCGGTTGTACAAACGTGAATTCAGTTAATCCGTATAACAGCTACGGGTGTTCTCCATTCTTAAAAACTATCACTTAAGTTTGTAAACGTCCTGGCTTTAGCGTGAAAATTCTCTGTAAAGTCGATTTTAGATTGCAAATTTGATTTTTCTTTAGTAGTTACACCTTAGATTTTGAACCTAAATTTTAGAAAGTCCAAATCATGAGTCGTATGCTTCATTCAAAGCTAGAATCATAAAATGCCGTACGGATCCCCAAAAATTTAACTATAAGTGTTGAAATCTTGAATCTTGAGCAACGTAACAATTGAC 1915 0.4527 MVDPYVLGWIMCTVLSLVALRNFLFASNNRCASSSALCAQNITTAAGECRSTNCSADVDVIIVGAGVAGSALAHTLGKIELLESCYNLEGYLKLIELGLEDCVEKIDAQQVFGYALFKDGKHTRLSYPLEKFHSNIAGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEEKGVIKGVHYKTKDSQEFSACAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCELPCANHGHVILGDPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVVAPQVPSDLHDAFIAAVDKGNIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLRDLNDAPSLCKYLECFYTLRKPVASTINTLAGALYRVFCASPDPARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRIWIGVRLISSASGIILPIIKAEGVRQMFFPATVPAYYRNPPVVQT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01217 509 PANTHER SQUALENE MONOOXYGENASE 26 505 IPR040125 GO:0004506|GO:0016126
Pste2g01217 509 FunFam Squalene monooxygenase 2 52 417 - -
Pste2g01217 509 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 59 81 - -
Pste2g01217 509 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 193 208 - -
Pste2g01217 509 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 321 336 - -
Pste2g01217 509 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 336 352 - -
Pste2g01217 509 Pfam Squalene epoxidase 194 466 IPR013698 GO:0004506|GO:0016020|GO:0050660
Pste2g01217 509 SUPERFAMILY FAD/NAD(P)-binding domain 57 418 IPR036188 -
Pste2g01217 509 Gene3D - 46 397 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01217 Pste-Chr2 13335650 13339799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01217 40 507 Miscellaneous Gene Families AT1G58440 74.433 0.0 744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01217 2 13335650 13339799 Pste2g01217 2 13335650 13339799 ECH
Pste8g00671 8 3494532 3499021 Pste2g01217 2 13335650 13339799 PCT