Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00215 ATAAAAGCCCAGTCTTCAATCCCAACTGGTCACAATCATCATCACACCCAAAAAATGAACCAAATAGCCCAGCAAATCAAGGCAGGATTGAAAGCTGCGATGGGAAGCTCCCAATCTAAAAAGCGTGAGTCTCAATTTTCTTCCAGAAACGTTGTTGCTGTTGAAGAGAGAGTTGTTCCTTCCACCTTGAACAGAACCTTGTCACCATCACCACCATCAATGGAACCGCCACAAGAACCTGTGTCTTTCAATAACCATAATAATCGTCATGCCTCTGCCAAAGATAAATATGCTCTCATTCCTGATAACTTCACTACCCTTCAACAGGTCACAACTGCCTTGAGGAACGAAGGATTAGAATCATCAAATCTGGTCCTTGGAATCGATTTTACAAAAAGCAATGAATGGACTGCCACTACTCATGATCGAGAAGTGTTTAGCTTTCATGATGATCATTCATCTTGCCATGGCTTTGAGGAAGTTTTGGCTTGCTATCAAAAAATAGTTCCAAACTTGAGACTTTCAGTGATTGAGGCTGCAATAGACATAGTTGAGAAAAGTCATGGCCAATTCCATGTATTAGTCATTGTTGCAGATGGCCAGGTTACAACAAGTGTTGCCTCTGAAGATGGAGAACTCAGTCCACAAGAAGCAAGGACAATCAAAGCAATAGCTGATGCAAGTTCATATCCCCTTTCTATAGTTCTGGTTGGAGTTGGTGATGGACCCTGGGATGACATGAAGAAGTTTGATGACAAGATACCAAGTCGGGAATTTGACAATTTTCAGTTTGTTAACTTCACTGAGATAATGTCTAAGAGATCAAGCTCCTCTGAAAAAGAAGCTGCTTTTGCTCTTGCTGCTCTAATGGAGATACCTTTCCAATATAAAGCAGCCATTGAACTTGGACTACTTGGGTTGGCATGTGCTATTTGTCTCACCAAAAGAAAGGACTTGGCCTTTGGATGTGGTCACATGACTTGCAGAGACTGTGGAGCCAGATTAAGCAACTGTCCGATATGCCGTGAGAGGATCACAAATCGTCTTAGGGTGTTTTCTAGCTAATTGAAAAATTGAAAATCACAATGTACAATTTGACTAACCTTTTGTTTGGAAAAAAAATTCTCTTATAGGTTTCTCATTAGATAAATCTTTTCATAAGCATTTATAGGAGAAGAAATTAAGATGGTAAAAAAATTGAGTTTCTCATAATCAACTTATCACTTCAACTTTTGGAAACGCTCTAGATAAAATATCTTCAATCAAGCTTAAAGAGTGTAAGTTGATTTTAACTTGTAAAAGAAACTCATTTTTTTCTTATCTATAAGTGTTTCTAGAAAATGTTTATCTAAACAGGACTAAGAAGATTAATGCCTTCTGTACATTTGGTGATGTGGCTTTTGTGAGTGCCCAAGAATGACCATGGTGTTGCATAGAAAAGGTGGTTTTTCATTCCAGGGAAGGTTTAGGAGTGGAAAAAATTGTGCATGTTTTTTTTTTAAGCTTTGTTAGTTGTTAAATTGGCTCATGTTCCATATCTGCTTGAATTTGAAGAATTTAGTTTGGTTGTTGATTATTGTACATATTGTTTATATGGTTAGAGGATTGTGCAAATACTAACTATTATATTCTGC 1634 0.3758 MNQIAQQIKAGLKAAMGSSQSKKRESQFSSRNVVAVEERVVPSTLNRTLSPSPPSMEPPQEPVSFNNHNNRHASAKDKYALIPDNFTTLQQVTTALRNEGLESSNLVLGIDFTKSNEWTATTHDREVFSFHDDHSSCHGFEEVLACYQKIVPNLRLSVIEAAIDIVEKSHGQFHVLVIVADGQVTTSVASEDGELSPQEARTIKAIADASSYPLSIVLVGVGDGPWDDMKKFDDKIPSREFDNFQFVNFTEIMSKRSSSSEKEAAFALAALMEIPFQYKAAIELGLLGLACAICLTKRKDLAFGCGHMTCRDCGARLSNCPICRERITNRLRVFSS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00215 336 Pfam Zinc finger, C3HC4 type (RING finger) 290 328 - -
Pste1g00215 336 SUPERFAMILY RING/U-box 289 330 - -
Pste1g00215 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 336 IPR013083 -
Pste1g00215 336 PANTHER COPINE FAMILY PROTEIN 1 22 119 - -
Pste1g00215 336 Pfam Copine 119 286 IPR010734 -
Pste1g00215 336 ProSiteProfiles Zinc finger RING-type profile. 291 324 IPR001841 -
Pste1g00215 336 SMART ring_2 291 323 IPR001841 -
Pste1g00215 336 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00215 Pste-Chr1 760094 776283 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00215 1 760094 776283 Pste1g00215 1 760094 776283 ECH
Pste3g01724 3 11014704 11027478 Pste1g00215 1 760094 776283 PCT