Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4133 ATGATAGCTAGGTTAGGAATCCTTGTAGCTGCTTCTGTTGCAGCCTATACATTTCAGCAGAATGTGAATGGATCAAAATCAGAACGCGGTGAAGCAAGGATTAGGGAGCATCAAGATGAGGGCTTAGAACAGAAGCATTCTATTTGTTCTTCTAATGGTGTTAACCGGAAAGAGAGGGAAGAAGAAGATCAAGAAGAGGAGATTGAGTTTCCGTTACTCGCTGGCAAGACCAACGAGGCCATGAAAGACGGAGAAAAGGAATTCGAAATGGGAAAAACCGGTAGTGAATTAGAACGGTTGCAAAATATAGTCAAGGAACTTGAGGAGAGGGAAGCGAATCTTGAAAGTGTGTTGCTTGAGTATTACGGTTTGAAGGAGCAAGTAGTAGAAACCGAAGAGTTACAGAGACAGTTGAGAATTAAAACTGTAGAAATCGATATGCTTCGTATGAGCGTTAAGTCCTTGCAGGAAGAGAACGATAAACTTCAAAAAGAGGTCACACGTGAAGCTTTATCAAATAAAGAACTTGAGGCTGCTAGAAACAAGATCAAGGAGCTGCAAACGCAGTTACGCGTCGCTGCCAACCAGACAAAAGGCCAGTTGTTGTTGCTTAAACAAAAAGTTTCTGGTCTACAAATGAAAGAAGAAGAGGTTGCGAGAAAAGATGCTGAGATCGAAAAGAAACTGAAAAATGCAAATGGATTAGAGATTGAAGTTGTGGAGCTTAAGAGAAGAAACAAAGAACTTCAACACGAGAAGCGAGAATTAACTGTTAGTCTTAATGCTGCTGAGTCTAGAATTGCAGAACACTCCAGTTTGACTGAGAACGAAATGTTTACCGAGGCGAAAACCGAAGTTGGTAGGTTGAGGCATGCAAATGAAGACCTGCAAAAGCAAGTGGAAGGACTCCAGATGAATAGGTTCAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTCAACGCGTGCTTGAGATATGAACTCAGGAATTACAAGGCACCCGTAGGAAAATCATCGGCGTGTGATCTAAATAACAGTCTCAGCCCAAAATCACAAGAGAAGGCTAAACAGCTAATGCTTGAATATGCCGGATCAGAGCGCGAGCATTGTGATACTGATCTTGAAAGCAACTTCTCCCGTGGTCACTCTTCACCAGGCAGTGAGGATCATGACAATGAATCTATCGATAGTCCTTCTTACAAATTCAGCAATCTTAGCAAGAAATCTAGCTTAATCCAAAAGTTGAAGAAATGGAATAAATACAAAGATTATTCAAGTGCTATTTCATCACCAACTAGATCTCTTTCAATAGGCTCTCCTTGCAGGGTGACTACGAGCTATAGACCGAGGAATACACTCGAATCCTTGATGCTAAGGAGCGCTCATGATGCGGTAGCGATCACTACTTTCGGGAGGAAGGAACACGGACCTACTCGTTCTCCTGAAACTCCATCTCTTCCAAGCTTGAGAAAGGTTTCATCGAGTAATGACATCCTGGATTCTGTTTCGGCTTCATTTCAATTGATGTCTAAGTCGGTTGACAGGTCTATGGATGAAAAATATCCTGCATATAAAGACCTCCATAAATTGGCATTGGCAAGGGAGAAGCAACTCAAGGAAAAGGCTGAGAAAGCAAGAGTGCAGAAGTTTGGCGACAATTCAAATCTTGATTTCACCGAGGCCGAACAAGAGAGACCAGTATCCTTGCAATCGAAACGTTTCCACGTTGAGATTAGGCCTCCAAGGGTGCCTCGACCACCTCCTAAACCATCTGACGGTGCTCCTGTTTCAAATTCTTACAATGGAATACCATATGCACCATCCGTGCCTTCTCCACCTTCACCGCCATCACTAGGAAGTCTACCTAAAGGATCATTAGGCGATGATAAAGTTAAAAGGGCTCCCGAGCTTGTTGAATTTTATCAATCTTTGATGAAACGAGAAGCAAAGGACACCTCATCACTTACTTCTTCGACAAGTAATGCAGCTGATGCCAGGAACAACATGATTGGAGAAATTGAGAATCGATCATCATTTCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAACTGAAGTTCGAGCAGCCTCGTTTTCTAAGATTGAAGATGTTGTTGCTTTTGTGAACTGGCTAGATGAGGAACTCTCATTCCTGATTGATGAACGAGCTGTTCTCAAGCACTTCAATTGGCCTGAAAGTAAAGCAGATGCACTACGGGAAGCGTCTTTTGAATATCAGGATATGATGAAATTAGAGAATCAAGTCTCCACCTTCACCGATGATCCAGAACTCCTTTGCAACGCTGCTTTGCAGAAAATGTACTCATTACTTGAAAAATTAGAGCAAAGTGTACACGCACTCTTACGGTCTAGAGATTTTTCCGTTTCACGGTACAAGGAGTTTGGAGTACCGGTAAATTGGCTATTCGATTCGGGAGTTGTTGGCAAGATCAAGCTTTCTTCTGTTCAACTGGCAAACAAGTATATGAAGCGCATTGCATCAGAGCTTGTTATACTATCCGGACCTGATACGGAACCGAGAAGAGAGTTTTTAATTCTGCAAGGTGTGCGGTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGGTTTGATATTGAGAGCATGAAGACTTTTGAAGAACTAAGAAACAACATTCATGCTCAAGCAGATGAACATGATGATAAATCAGAAACAAAGACATAG 2724 0.4225 MIARLGILVAASVAAYTFQQNVNGSKSERGEARIREHQDEGLEQKHSICSSNGVNRKEREEEDQEEEIEFPLLAGKTNEAMKDGEKEFEMGKTGSELERLQNIVKELEEREANLESVLLEYYGLKEQVVETEELQRQLRIKTVEIDMLRMSVKSLQEENDKLQKEVTREALSNKELEAARNKIKELQTQLRVAANQTKGQLLLLKQKVSGLQMKEEEVARKDAEIEKKLKNANGLEIEVVELKRRNKELQHEKRELTVSLNAAESRIAEHSSLTENEMFTEAKTEVGRLRHANEDLQKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYKAPVGKSSACDLNNSLSPKSQEKAKQLMLEYAGSEREHCDTDLESNFSRGHSSPGSEDHDNESIDSPSYKFSNLSKKSSLIQKLKKWNKYKDYSSAISSPTRSLSIGSPCRVTTSYRPRNTLESLMLRSAHDAVAITTFGRKEHGPTRSPETPSLPSLRKVSSSNDILDSVSASFQLMSKSVDRSMDEKYPAYKDLHKLALAREKQLKEKAEKARVQKFGDNSNLDFTEAEQERPVSLQSKRFHVEIRPPRVPRPPPKPSDGAPVSNSYNGIPYAPSVPSPPSPPSLGSLPKGSLGDDKVKRAPELVEFYQSLMKREAKDTSSLTSSTSNAADARNNMIGEIENRSSFLLAVKADVETQGDFVMSLATEVRAASFSKIEDVVAFVNWLDEELSFLIDERAVLKHFNWPESKADALREASFEYQDMMKLENQVSTFTDDPELLCNAALQKMYSLLEKLEQSVHALLRSRDFSVSRYKEFGVPVNWLFDSGVVGKIKLSSVQLANKYMKRIASELVILSGPDTEPRREFLILQGVRFAFRVHQFAGGFDIESMKTFEELRNNIHAQADEHDDKSETKT* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4133 907 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 901 IPR040265 -
Psa6g4133 907 MobiDBLite consensus disorder prediction 28 44 - -
Psa6g4133 907 Coils Coil 211 266 - -
Psa6g4133 907 Coils Coil 279 306 - -
Psa6g4133 907 MobiDBLite consensus disorder prediction 24 67 - -
Psa6g4133 907 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 901 - -
Psa6g4133 907 Coils Coil 145 196 - -
Psa6g4133 907 Coils Coil 90 120 - -
Psa6g4133 907 MobiDBLite consensus disorder prediction 472 492 - -
Psa6g4133 907 MobiDBLite consensus disorder prediction 566 582 - -
Psa6g4133 907 MobiDBLite consensus disorder prediction 556 594 - -
Psa6g4133 907 MobiDBLite consensus disorder prediction 376 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4133 Psa-Chr6 363666740 363670894 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4133 - - mtr:MTR_1g093850 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4133 6 363666740 363670894 Psa6g4133 6 363666740 363670894 ECH