Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0441 ATGGATTTCATGAAAGTCTTCGATCAAACCGTTCGAGAAATAAAAAGAGAAGTAAATCTGAAGGTGCTTAAGGTTCCGGAGATCGAACAGAAGGTGTTGGATGCAACTGATGATGAACCTTGGGGTCCCCATGGTACTGCTCTGGCAGAGATTGCAACAGCTACCAAAAAATTTACTGAATGTCAGCTAGTTATGAATGTCCTTTGGACAAGATTGAGTGAAACCGGGAAGGATTGGCGATATGTGTACAAGGCATTAGCTGTTATAGAGTATTTGGTATCACATGGATCTGAACGTGCAGTTGATGACATTATAGAACATACTTTTCAGATCTCTGCACTTTCTAGTTTTGAATATGTTGAGCCCAGTGGGAAGGATGTGGGACTCAATGTGAGGAAGAAGTCAGAAAACATTGTGTCCCTTTTGAATGATAGAGAAAAGATAAGTCAAATCAGAAATAAAGCTGCTGCAAACCGTGACAAGTATGTTGGAGTTTCATCTAGTGGAATCACATACAAGTCCGGGAACAACTCGTTTAGTAGTGGGAGTTCCCAAGCAGTGATAGGTATAGTGATAGCTACGGAGACAAGGGGCGCTAACGATGAAGAAAAAGTAGACAAAGATTACTCAGGAAAATCACGCTATGGTGACTCAAGTAACGATCAAGAAAACTCCTTCAAGAAGGCTTCTGCACGGTCTGTCAGCAAAAGCAAGGAAAAGACATCATCTAGAGCATCGAAGTCATCTGTTAATGCAAGTTCAGTTCCTTCTCAAAGTTCAAGTGTAACTGCAAACAATACTGAGGATGACTTTGATGATTTTGATCCTAGAGGAACATCTACTAAGACTCCAGTTGGGAGCTCAAACCAGGTTGATCTCTTTGGACAAGATTTGATTGGTGACCTCATGGATGCTCCAACATCTGTTTCTGTAGAAAAGCCTGCAACTAATGACGTGTCAGAGGTTGATCTCTTTGCAGATGCAGCATTTGTATCAGCACCACCACATACGGACAAAGGAGCTAGTTCTCAACCACAGGAAGAAGTGGATCTTTTTTCTTCACAACCAGCCATTTCTTCAGCTACACCAACAGTTGACTTGTTTTCCATTCCTGCACCGGCTGTGCAGCCTGACAGCAAGTCGGAAAACTCTGCTCCTGTGACTAACAGCACTTTTGATCCCTTCGCTTCTGTTCCACTTAATAATTTTGATGGATCTGATCTTTTTGGCGATTTTACTTCTCAATCTGATACTGTATCTTCACAGCCCTCAGCTAATGCTATCACCGATGGTAGTACGAGTGCTAAATCTTTAGTGGACTCTAACGTTTCACCTAAAAAAGATGCTTTTCAGTTGAAATCTGGCATTTGGGCTGATTCACTAAGCCGTGGGTTGATTGATCTCAATATATCTGCTCCCAAAAAAGTATCCCTTGTAGATGTTGGAATTGTGGGTGGATTGAGTGATGGATCAGATGAAAGGGAGAAAGGCCCTCCTCCAGCTACATTTTACATGGGTAGAGCCATGGGTTCAGGATCTGGCCTTGGTATGTATGGTGGCACTCCTTCAAAGCCAACAACTGGAGACGACATATTTTCAAACTTTGGCAGCCAAAACTATCAATATGGTGGGTTCCAAAAGTAA 1644 0.4227 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTALAEIATATKKFTECQLVMNVLWTRLSETGKDWRYVYKALAVIEYLVSHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKSENIVSLLNDREKISQIRNKAAANRDKYVGVSSSGITYKSGNNSFSSGSSQAVIGIVIATETRGANDEEKVDKDYSGKSRYGDSSNDQENSFKKASARSVSKSKEKTSSRASKSSVNASSVPSQSSSVTANNTEDDFDDFDPRGTSTKTPVGSSNQVDLFGQDLIGDLMDAPTSVSVEKPATNDVSEVDLFADAAFVSAPPHTDKGASSQPQEEVDLFSSQPAISSATPTVDLFSIPAPAVQPDSKSENSAPVTNSTFDPFASVPLNNFDGSDLFGDFTSQSDTVSSQPSANAITDGSTSAKSLVDSNVSPKKDAFQLKSGIWADSLSRGLIDLNISAPKKVSLVDVGIVGGLSDGSDEREKGPPPATFYMGRAMGSGSGLGMYGGTPSKPTTGDDIFSNFGSQNYQYGGFQK* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0441 547 SUPERFAMILY ENTH/VHS domain 7 150 IPR008942 -
Psa6g0441 547 MobiDBLite consensus disorder prediction 244 267 - -
Psa6g0441 547 Pfam ENTH domain 27 147 IPR013809 -
Psa6g0441 547 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Psa6g0441 547 MobiDBLite consensus disorder prediction 198 214 - -
Psa6g0441 547 Gene3D - 19 165 IPR008942 -
Psa6g0441 547 SMART enth_2 26 152 IPR013809 -
Psa6g0441 547 PANTHER EPSIN/ENT-RELATED 1 538 - -
Psa6g0441 547 MobiDBLite consensus disorder prediction 215 231 - -
Psa6g0441 547 MobiDBLite consensus disorder prediction 415 440 - -
Psa6g0441 547 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 538 IPR033521 GO:0006623|GO:0030276
Psa6g0441 547 CDD ENTH 28 144 - -
Psa6g0441 547 MobiDBLite consensus disorder prediction 198 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0441 Psa-Chr6 14506927 14513070 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0441 K12471 - gmx:100809198 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0441 6 14506927 14513070 Psa6g0441 6 14506927 14513070 ECH