Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0427 ATGAAGGAAGATGAAGGTGATGATAGGAAAATCAACGATGATAAATTTGTTCAAGATATCAAACTTTGGGGAGTTTTCCTCTTCGGATTAATCGGCGCTACCGCCACCACCTTCGCCCTGTCCAGGTCTTTGAAAGGAGGGAATGTCGGTTCTTTTCGAACGACTTTTCAAGAAGAAGCATGGAAGAGGTACAATAAGCGACTGCAAGAGGAGTATGAGGAAGAGATGGAGAGAGTGGAAAGAATAAGGCGTATGCAAGATGTGTTTAATAGAGAAAGGAATAAGTATAGACGAAATCCCGAGAACTGGAAGGAAAATGGTTCTGGTACATATCATCAGAATTTCCAAAGAGATGATTGGTATTGGAAGGCTGAACAAACCTTCAGAGACCAGTGGAAAAATTACCCAAGGGACAATGGAAGCATAAATTATTCATTATTATCACACCACTACTCAGTTTTGGGTCTCGACAGGTCTAGAACGACACCATATACAGATGCTGAAATTAAGACAGCATTTAGGACCAAGGCAAAGCAGTTTCATCCTGACCAGAACCAAGAGGATAGAGTGGCTGCTGAGGCTAAGTTCAAAGAAGTTATGAGTTCATACGAGGCCATACAACAAGAAAGAAAGAATCATAAGGTAGAGACGACTATTGCTGGCAGAACTACCGATAGAATGGTAAACCAGATTAGGACTGCTGAGGTTAAGTCTTTCTGGATACAGGCTGGACGAGTGGTTCCAATCGGTTCACACCAGAAACGGTTGGTTGAGCAGGTCCAGAGAGATGATGTGGCGGAGGAGATGGAAGATGAGGTTGTTGCTGAAGATGTTGTTAGAGAAGTTGCTGAGGAGGTTGCTAGAGATGTTGGTGAGGAGACTACTGGAGAGGTTGTTGGAGTTGGAAAGGTTGTTGGGGTGGTTGTTGATGAGGTGACTACTGAGCAGGTCCAATCAGATGTTGTTGTTGATCCAGTCTCATATGTTACTATTGACACAGAGGTTACAACTCCTTCGACTGAGCCCTATGTGCACACTAATGGAGGATTTCTTGGAGGATCCATTGACCGGTCGGTACGTACGGAGCATTCAGACCATTTGGTGTTACGACTATGGCAATAA 1122 0.4385 MKEDEGDDRKINDDKFVQDIKLWGVFLFGLIGATATTFALSRSLKGGNVGSFRTTFQEEAWKRYNKRLQEEYEEEMERVERIRRMQDVFNRERNKYRRNPENWKENGSGTYHQNFQRDDWYWKAEQTFRDQWKNYPRDNGSINYSLLSHHYSVLGLDRSRTTPYTDAEIKTAFRTKAKQFHPDQNQEDRVAAEAKFKEVMSSYEAIQQERKNHKVETTIAGRTTDRMVNQIRTAEVKSFWIQAGRVVPIGSHQKRLVEQVQRDDVAEEMEDEVVAEDVVREVAEEVARDVGEETTGEVVGVGKVVGVVVDEVTTEQVQSDVVVDPVSYVTIDTEVTTPSTEPYVHTNGGFLGGSIDRSVRTEHSDHLVLRLWQ* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0427 373 Pfam DnaJ domain 150 212 IPR001623 -
Psa6g0427 373 Coils Coil 58 85 - -
Psa6g0427 373 CDD DnaJ 150 204 IPR001623 -
Psa6g0427 373 PRINTS DnaJ domain signature 151 169 IPR001623 -
Psa6g0427 373 PRINTS DnaJ domain signature 173 188 IPR001623 -
Psa6g0427 373 PRINTS DnaJ domain signature 191 211 IPR001623 -
Psa6g0427 373 SUPERFAMILY Chaperone J-domain 149 217 IPR036869 -
Psa6g0427 373 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 214 - -
Psa6g0427 373 ProSiteProfiles dnaJ domain profile. 149 211 IPR001623 -
Psa6g0427 373 SMART dnaj_3 148 211 IPR001623 -
Psa6g0427 373 Gene3D DnaJ domain 145 239 IPR036869 -
Psa6g0427 373 PANTHER HEAT SHOCK PROTEIN-BINDING PROTEIN 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0427 Psa-Chr6 13963451 13968673 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0427 - - gmx:100804936 311.612