Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g0426 ATGATGGATCTGTATTTGCTCGGTTGGATTTTAAGTTCCGTTTTGAGTTTATTTGCGTTGTACAGTTTGGTTTTCTCCGGGAAGAGAAACTCTGCTGCGTCGGTGAAGCCGAGTCAGCGCGGGGAAAGCGTGACGACTGATGCCGGAGAGATTAAATCGGAGAAGCTTAACCGTGACGCTGATGTTATTATTGTTGGAGCCGGTATCGCTGGCGCGGCTTTGGCTCATACTCTCGGGAAGGATGGACGAAGAGTGCACGTCATTGAAAGAGATCTGACTGAACCTGACAGGATTGTTGGAGAGTTGCTACAACCTGGAGGCTATCTCAAATTAGTTGAACTGGGGCTTGAAGATTGTGTGGACAAGATTGATGCTCAGAAAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAACATACTCGTCTCTCTTATCCCTTGGAAAAGTTTCACTCAGATGTCTCTGGCAGAAGTTTTCACAATGGACGTTTTATTCAGAGGATGCGAGAGAAAGCTTCCTCCCTTCCCAATGTAAATATGGAGCAAGGAACAGTCACTTCCCTACTTGAAGAGAAGGGGACAATCAAAGGTGTGCAATACAAGAATAAAGATGGTCAGGAATTGACAGCTTATGCTCCTCTTACCATTGTTTGTGATGGCTGTTTTTCAAACTTGCGTCGTTCTCTTTGCAACCCTAAGGTAGACAACCCCTCTTGCTTTGTTGGCTTAATTTTAGAGAACTGTGAACTTCCATGTGCCAATCATGGCCACGTCATACTTGGAGATCCTTCGCCAATTCTTTTCTATCCTATAAGTAGTACAGAGATTCGTTGTCTGGTTGATGTACCTGGTCAGAAGGTTCCCTCTATTTCAAATGGTGATATGAAAAAGTATCTAAAGACTACAGTTGCTCCTCAGGTCCCCCCTGAGCTTTATGATGCATTCATAGCCGCAGTCGACAAAGGCAACATAAGGACAATGCCGAACAGAAGTATGCCAGCAGATCCCCGTCCTACTCCCGGCGCTGTACTGATGGGAGATGCATTCAACATGCGTCATCCACTAACAGGGGGCGGAATGACAGTAGCACTGTCGGATATTGTGGTGCTGAGAAATCTTCTCAAGCCTTTGCGTGACCTTAATGATGCACCCACACTTTGCAAATACCTTGAATCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACCATAAATACATTGGCAGGTGCCCTTTACAAGGTTTTTTGTGCATCCCCTGATCAAGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTGAGCCTTGGGGGCCTATTCTCAGAAGGACCGATCTCTTTACTTTCAGGATTAAACCCTCGTCCCTTAAGTTTGGTTCTCCATTTCTTTGCTGTCGCAGTATATGGTGTTGGTCGTTTACTATTACCATTTCCTTCACCTAAGCGGGTGTGGCTTGGAGCTCGATTACTCTCTGGTGCATCTGGAATCATCTTGCCCATAATTAAGGCTGAAGGAATTCGCCAAATGTTTTTCCCTGCCACTGTTCCAGCTTATTACAGAACGCCTCCGGTGTCACAAGAGTGA 1581 0.4567 MMDLYLLGWILSSVLSLFALYSLVFSGKRNSAASVKPSQRGESVTTDAGEIKSEKLNRDADVIIVGAGIAGAALAHTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLVELGLEDCVDKIDAQKVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKASSLPNVNMEQGTVTSLLEEKGTIKGVQYKNKDGQELTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILENCELPCANHGHVILGDPSPILFYPISSTEIRCLVDVPGQKVPSISNGDMKKYLKTTVAPQVPPELYDAFIAAVDKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSEGPISLLSGLNPRPLSLVLHFFAVAVYGVGRLLLPFPSPKRVWLGARLLSGASGIILPIIKAEGIRQMFFPATVPAYYRTPPVSQE* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g0426 526 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 525 - -
Psa6g0426 526 Pfam Squalene epoxidase 211 483 IPR013698 GO:0004506|GO:0016021|GO:0050660
Psa6g0426 526 PANTHER SQUALENE MONOOXYGENASE 1 525 IPR040125 GO:0004506|GO:0016126
Psa6g0426 526 Pfam NAD(P)-binding Rossmann-like domain 64 90 - -
Psa6g0426 526 SUPERFAMILY FAD/NAD(P)-binding domain 60 434 IPR036188 -
Psa6g0426 526 Gene3D - 48 414 IPR036188 -
Psa6g0426 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Psa6g0426 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 - -
Psa6g0426 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 - -
Psa6g0426 526 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g0426 Psa-Chr6 13954945 13959640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa6g0426 35 526 Miscellaneous Gene Families AT1G58440 77.756 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g0426 K00511 - gmx:100804406 940.643