Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g1409 ATGGGCAACGTCAATGTTAAAAAGCGTAACGCTCAATTTTCCAGAAATGTTAAAGCGGAACGCAGAAGTAGTAGCTCATCCGACCTAACTAACCGATCGGTGCCTCAGCTTCCACGACCGCAGCAGCGGCAGGAGCAGCCGCCGCCGCCGCCGCCGATGATGATGCAGAGGAAATCGAGTAAAAATAACCGATCTTCGGGAGAAAGCTCCGTCGTAGCGGGGAAGGAATCTGCGAAGAAGAAATATGCTTTGATTCCCGATAACTTCACTACCCTAGAGCAGGTTACTGCAGCCTTGAGGAAAGAAGGTTTGGAATCTTCAAATCTCATCCTTGGAATTGATTTCACTAAGAGCAACGAGTGGACTGGCAAAATGTCATTCAATAATAGAAGCCTGCATGCTATTGGAGCAACACCCAACCCCTACGAGAAGGCCATCTCTATTATTGGCAAGACCTTGGCACCCTTCGATGATGACAATTTAATTCCATGTTTTGGCTTTGGTGATGTTACCACCCATGATCAAGAAGTGTTTAGCTTTCACAGTGATCACTCATCCTGTCATGGTTTTGAGGAAGTCCTGGCTTGCTACCAAAAAATAGTTCCGAACCTGAAACTTTCAGGGCCTACTTCTTATGGTCCGGTGATTGAGGCTGCAATAGATATAGTTGAGAAAAATCGTGGCCAATTCCATGTGTTGGTTATAATTGCAGATGGCCAGGTTACAAGAAGTGTCAACTGTGATGACAAAGAACTCAGTCCTCAAGAACAGAAGACCATCCAAGCTATTGTTGATGCAAGTTCATATCCACTTTCGATTATTCTTGTTGGAGTTGGTGATGGACCTTGGGAAGACATGAGAAAGTTTGATGACAAGATACCTGCACGTGATTTTGATAATTTTCAGTTTGTTAATTTCACTGATATTATGTCTAAAAATTCAAGCCCCTCTCAGAAAGAAGCAGCTTTTGCTTTGGCTGCTCTTATGGAGATACCGTTCCAGTATAAAGCAGCTATTGAACTTGGAATACTTGGCCGTGTAACAGGAAGGGCAAAGAAAATAATTCCACGACCTCCTCCAGTTCCTTATTCTCGACCTGCACCACCGGCTCGTGTACCGAGTGATATACACTCATCAACAGATGATGAGCGAAATCAGCAGGTCTGCCCTATCTGCCTGACAAATGCAAAGGACTTGGCCTTTGGGTGTGGGCACATGACTTGCAGAGATTGTGGAGCCAGGTTAACCAACTGTCCCATTTGCCGAGAGCGGATCACTTCTCGTCTCAGGGTTTTCACCGGGTGA 1305 0.4544 MGNVNVKKRNAQFSRNVKAERRSSSSSDLTNRSVPQLPRPQQRQEQPPPPPPMMMQRKSSKNNRSSGESSVVAGKESAKKKYALIPDNFTTLEQVTAALRKEGLESSNLILGIDFTKSNEWTGKMSFNNRSLHAIGATPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDVTTHDQEVFSFHSDHSSCHGFEEVLACYQKIVPNLKLSGPTSYGPVIEAAIDIVEKNRGQFHVLVIIADGQVTRSVNCDDKELSPQEQKTIQAIVDASSYPLSIILVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNSSPSQKEAAFALAALMEIPFQYKAAIELGILGRVTGRAKKIIPRPPPVPYSRPAPPARVPSDIHSSTDDERNQQVCPICLTNAKDLAFGCGHMTCRDCGARLTNCPICRERITSRLRVFTG 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g1409 434 MobiDBLite consensus disorder prediction 355 369 - -
Prci7g1409 434 SMART VWA_4 106 309 IPR002035 -
Prci7g1409 434 Pfam Copine 131 344 IPR010734 -
Prci7g1409 434 MobiDBLite consensus disorder prediction 41 55 - -
Prci7g1409 434 Pfam Zinc finger, C3HC4 type (RING finger) 386 427 - -
Prci7g1409 434 MobiDBLite consensus disorder prediction 1 76 - -
Prci7g1409 434 SMART ring_2 389 421 IPR001841 -
Prci7g1409 434 Gene3D von Willebrand factor, type A domain 108 320 IPR036465 -
Prci7g1409 434 PANTHER COPINE FAMILY PROTEIN 1 44 409 - -
Prci7g1409 434 ProSiteProfiles Zinc finger RING-type profile. 389 422 IPR001841 -
Prci7g1409 434 SUPERFAMILY vWA-like 107 290 IPR036465 -
Prci7g1409 434 SUPERFAMILY RING/U-box 384 429 - -
Prci7g1409 434 MobiDBLite consensus disorder prediction 355 382 - -
Prci7g1409 434 MobiDBLite consensus disorder prediction 56 72 - -
Prci7g1409 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 434 IPR013083 -
Prci7g1409 434 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g1409 Prci-Chr7 30097902 30108489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g1409 K16280 - gmx:100795579 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g1409 7 30097902 30108489 Prci7g1409 7 30097902 30108489 ECH