Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2878 ATGGCTGTGGAAGCTCATCATCTCAATCAGTTTTCCTCACACCTCTTGGGCAATCGAGATATCATTGCCTCTGTTCAACCGAGTATGAATCTGATCTACAATAACGCCCAGATGCACACTTATAACTCCTCCCTTCTCCCATTATCGGGCACTTCCACCGCCACCGCCACCGACGCTGCTCTTCTTCCGGCGCCTTACAGTTCTTTCATCGTCGATTCTCTTCCTCAGAAAAATCCAATGAAATCTGACAGTGGCCTCTCCTACGGTCTCCCCGTCGCGTCTAGAAAGCGTTCCAGAGATTCCACTAATTACCCCCTTCTCTCCTACAAGAACACTACTGACATTGATAGCAGCTGTGCCGCTTTTTCATTCCTCGGCCAAGACATTTCGCTTCAGATCCAACAGCATCAACTCGATATCGACCGTCTCGTTGCCCACCATATGGAGAACGTGAGGGTGGAATTAGAGGAGAAGCGGAAGAGGCAAGCCAGGAGGATTTTAGAGGCGATCGAAGTTGGGATGATGAAGAGGCTCAGAGCGAAGGAAGAAGAGATAGCCAAGATTGGGAAACTGAATTGGGCTCTGGAACAGAAGGTGAAGTCGCTTTACATGGAGAATCAAATTTGGCGGGATTTGGCGCAGACCAACGAGGCCACAGCCAATGCTCTTCGTACAAACCTGGAGCAAGTATTAGCTCAATTCAAGGATGAGCGTCGATTAAACGACGACGAAGGTGCCACAGTCGTCCCCGCCGGAGCAGAACTGATGGAAGATGCACAGTCTTGCTGTGGAAGCACGGGAGGCGTCGACATCGACGAGCTGCGAGATGAAGGAAGCAACGAAGGGGAGGACTTGGAAGGGTGGCGCCGGGTAGGCGGGGCTGCGAAGGCTAAGGAGGAGGAAGAAGGTAATAAAACAAGGAGAAACGGCATGAGCAACCAGAGCAGATTGTGCAGGAAGTGTGGGAGAGAGGAATCGTGCGTGCTGATCCTGCCGTGCAGGCACCTGTGCCTCTGTCCTGTTTGTGGCTCTTCTCTCAACACTTGTCCCATCTGTAATTCCTTCAAAACTGGTAGCGTCCATGTTAACATGTCCTGA 1098 0.5137 MAVEAHHLNQFSSHLLGNRDIIASVQPSMNLIYNNAQMHTYNSSLLPLSGTSTATATDAALLPAPYSSFIVDSLPQKNPMKSDSGLSYGLPVASRKRSRDSTNYPLLSYKNTTDIDSSCAAFSFLGQDISLQIQQHQLDIDRLVAHHMENVRVELEEKRKRQARRILEAIEVGMMKRLRAKEEEIAKIGKLNWALEQKVKSLYMENQIWRDLAQTNEATANALRTNLEQVLAQFKDERRLNDDEGATVVPAGAELMEDAQSCCGSTGGVDIDELRDEGSNEGEDLEGWRRVGGAAKAKEEEEGNKTRRNGMSNQSRLCRKCGREESCVLILPCRHLCLCPVCGSSLNTCPICNSFKTGSVHVNMS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2878 365 ProSiteProfiles Zinc finger RING-type profile. 318 353 IPR001841 -
Prci6g2878 365 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 88 362 IPR017066 -
Prci6g2878 365 MobiDBLite consensus disorder prediction 292 307 - -
Prci6g2878 365 CDD mRING-HC-C3HC5_CGRF1-like 316 352 - -
Prci6g2878 365 MobiDBLite consensus disorder prediction 292 312 - -
Prci6g2878 365 Pfam Zinc finger, C3HC4 type (RING finger) 315 354 - -
Prci6g2878 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 365 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2878 Prci-Chr6 41716504 41718026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2878 300 354 Miscellaneous Gene Families AT4G39050 38.182 5.42e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2878 6 41716504 41718026 Prci6g2878 6 41716504 41718026 ECH