Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1297 ATGGTTGAACTTCATCGAATCAGTTCAAATTTAATAGATTGGAAGCCTTCTCCGGTAGTATCTTTAGCCACCAGCGTCGATGGCCTGCAGGTCGCCGCCGCCCGTGAAGATGGCTCCTTGGAGATTTGGCTTGTCTCCCCCGGTTCCGTTGGCTGGCACCGTCAGTTGACTATTCATGGAGACCCTAATGTAAGAGTATCCTCCCTTATTTGGTGCCACGGGGGTTCAAGGCGAATGCCATTCGGTCGATTATTCTCATCTAACATCGATGGTTCAGTTTCTAAGTGGGATATTTCCCACTTGACACAGAAGACTGTGCTAGGTTCAATTGGTGTCTCAATCTGGCAAATGGCAGTGGCACCATCTAAAAGTGACATTAATAATACTGAAGCAGAACCGGATCATACGGGCAATGGATACTTGACTTATAGTAAAGACGATCTTGACGACGAACATGAAAGTAGTGAAAGTGAAGGAGATTTTGACTCACCTGATTCTCTTAAAGCACTTGAGTATCCACGTGTAGCTATTGGTTGTGATGATGGATGTGTGCGAATTTATTCCATCTCTGACACAGACGAGTTCACGTGTACAAAATCGTTGCCTCGGGTCAGTGGACGAGCTTTAAGCGTGACTTGGAGTTCAGACGCAAGTTTCATATATTCAGGAAGTAGTGATGGCTTGATACGATGCTGGGATGCTACACTGGGTCGTGAAATATATAGGATTACAGCAGGGCTTGGAGGTCTGGGTAGTGGGCCTGAACTTTGTATTTGGTCATTACTGTCGTTAAGGTCTGGGACACTGGTTAGTGCAGACAGCAGTGGTAGCGTCCAGTTTTGGGACGGCCAACATGGAACTCTCTTACAAGTACATTCATTGCACAAGGGAGATGTAAATGCCCTGGCTGCGGCTCCAACTCATAACAGGGTGTTCTCTGCTGGCTCTGATGGCAAGATTATCCTGTATAAGCTCTCCTGTGAGTCAGCGTCATCCAACAGTATTGAGTCACCAGCAGTGATGAAGAGATGGATTTATGTTGATTATGTGAGGGCTCATACGCATGACGTCAGGGCCTTGACTGTGGCAGTACCAATTTGTCGAGAAGATTCCTTGCCAGATGAGAAGATTAAAAGAGCTCGTCGTGAAAAACCCATTGATTTTAGTTACCGTAAATGGGCCCATTTGGGTGTTCCCATGTTGATATCAGCAGGTGATGACACAAAACTCTTTGCATATGCTGTAAAGGAGTTCACTAAATTCTCTCCACATGATATCTGCCCTGCACCACAGAGAACTCCCATTCAACTAGTGCTAAAAACAGCCTTCAATCCATCAGCAATTCTTCTAGTCCAGTCTTCTTTTTGTTTAGATATTATTTCTGTACAACCCAAAAAAGGTGTCTTCACCGACAATACACGTCCCACCTTGGGTGGCTTTGCAAAAAGTAATCTGCTTGCTCGAGTTAAGAGCAATTCATCTTGGAAAATAATTTGCAGCACCATTGCTGATTCAGGGGTGCTGTTTGCATACTCTGATCATGTGAAGCCCAGTCTATTTGAATTGAAGAGCCCTGATGTTGGGAAAAGTACATGGAGTGTTAGGAAAAGGCAACTCCCTGGTAGACTACCATTTGCTCATTCTATGATTTTTACTCATGATTCCTCTCGGTTGATAGTAGCTGGGCATGATCGAAGGATATATATTGTGGACGTGGCCAGTTCAGAATTAGTGCATGTCTTTACCCCATCCCGTGAGATGCAAGATGAAGGGTTACCTCCAACTGAACCTCCTATAACAAGGATGTTTGCCAGTTCTGATGGGCAGTGGCTGGCAGCTGTGAATTGCTTTGGAGATATATATGTATTCAATCTCGAGATACTAAGGCAGCACTGGTTCATTTCTAGATTTGATGGCGCCTCTGTTACTGCTGGTGGATTTCCTCCCCAGAACAACAGTGTACTTGTAGTTACAACTTCCTCAAATCAAGTGTATGCGTTGGATGTAGAAGCCAAGCAGTTGGGAGAATGGTCAATGCGGCATACATTTGTTCTTCCAAAGCGATTCCAGGAATTTCCTGGCGAAGTTATTGGGCTCTCATTCCCTCCCTCCTCAACTTCATCTTCTGTTGTTGTTTACAGTGCCAGGGCAATGTGTTTGATCGATTTTGGGTTGCCGGTGGAGCAAGATGATGGTGATCTATTAAATGCTCAGGATTCAATGGCTAAAAATTTACAAAATTATCTCAAGAGGAAACACAGGCATAGGAAGAATTTTGAAATTTTGGAATTCAGGGATCCTGTTTTATTTTTAGCCCACCTTTCGAAAAGTTCCGTCTTATTACTAGACAAGCCGTGGTTAGAAGTGGTTAGAAGTTTAGAAGCCCCACCAGTCCACAGACATATTTTTGGGACATAA 2418 0.4429 MVELHRISSNLIDWKPSPVVSLATSVDGLQVAAAREDGSLEIWLVSPGSVGWHRQLTIHGDPNVRVSSLIWCHGGSRRMPFGRLFSSNIDGSVSKWDISHLTQKTVLGSIGVSIWQMAVAPSKSDINNTEAEPDHTGNGYLTYSKDDLDDEHESSESEGDFDSPDSLKALEYPRVAIGCDDGCVRIYSISDTDEFTCTKSLPRVSGRALSVTWSSDASFIYSGSSDGLIRCWDATLGREIYRITAGLGGLGSGPELCIWSLLSLRSGTLVSADSSGSVQFWDGQHGTLLQVHSLHKGDVNALAAAPTHNRVFSAGSDGKIILYKLSCESASSNSIESPAVMKRWIYVDYVRAHTHDVRALTVAVPICREDSLPDEKIKRARREKPIDFSYRKWAHLGVPMLISAGDDTKLFAYAVKEFTKFSPHDICPAPQRTPIQLVLKTAFNPSAILLVQSSFCLDIISVQPKKGVFTDNTRPTLGGFAKSNLLARVKSNSSWKIICSTIADSGVLFAYSDHVKPSLFELKSPDVGKSTWSVRKRQLPGRLPFAHSMIFTHDSSRLIVAGHDRRIYIVDVASSELVHVFTPSREMQDEGLPPTEPPITRMFASSDGQWLAAVNCFGDIYVFNLEILRQHWFISRFDGASVTAGGFPPQNNSVLVVTTSSNQVYALDVEAKQLGEWSMRHTFVLPKRFQEFPGEVIGLSFPPSSTSSSVVVYSARAMCLIDFGLPVEQDDGDLLNAQDSMAKNLQNYLKRKHRHRKNFEILEFRDPVLFLAHLSKSSVLLLDKPWLEVVRSLEAPPVHRHIFGT 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1297 805 Pfam WD domain, G-beta repeat 210 233 IPR001680 GO:0005515
Prci2g1297 805 Gene3D - 544 740 IPR015943 GO:0005515
Prci2g1297 805 MobiDBLite consensus disorder prediction 124 166 - -
Prci2g1297 805 Gene3D - 259 454 IPR015943 GO:0005515
Prci2g1297 805 SUPERFAMILY WD40 repeat-like 256 703 IPR036322 GO:0005515
Prci2g1297 805 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 805 IPR044622 GO:0010073|GO:0035266
Prci2g1297 805 Gene3D - 135 258 IPR015943 GO:0005515
Prci2g1297 805 Gene3D - 6 134 IPR015943 GO:0005515
Prci2g1297 805 ProSiteProfiles Trp-Asp (WD) repeats profile. 210 242 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 536 571 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 574 624 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 51 97 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 194 233 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 244 282 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 285 324 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 100 188 IPR001680 GO:0005515
Prci2g1297 805 SMART WD40_4 8 44 IPR001680 GO:0005515
Prci2g1297 805 SUPERFAMILY WD40 repeat-like 16 326 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1297 Prci-Chr2 9731667 9738674 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1297 K14548 - qsa:O6P43_015972 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1297 2 9731667 9738674 Prci2g1297 2 9731667 9738674 ECH