Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1291 ATGTTCTTCCACGACGACGTCGTCCATTCCCTCCAGTTCCCATCATGCCCACTTCCCGAAACCATGCTCACGCCAAGTGAGGTGCAGGAGTTATTGTCCCTCGTTCAAGCCAAGGATCCGGCCAGTCCAAGCTCCGGTTCGCAAAGTTCGAGTCGAGCGGTTTACTCGTTGGACGAGAGAAAGCGCAGGCGCATGCAGTCGAACCGGGAGTCAGCCCGGCGGTCCCGCTGGAGAAAGAAGAGGCATCTAGAGAACCTCACGAACCAAGTGAACCGCCTAAAATTTGAAAACCAACAACTCAAAAACCAGCTAGGCTTCACCCTTCACCAGCATCTCATAGTTTCCCTAGAGAACGCCCAACTAAGATCCGAATCCGAAATCCTCACGACCCGGCTGTCGCATCTCTATGGGGCTTTAGGCACCACTCTAAGCCCTTAA 438 0.5388 MFFHDDVVHSLQFPSCPLPETMLTPSEVQELLSLVQAKDPASPSSGSQSSSRAVYSLDERKRRRMQSNRESARRSRWRKKRHLENLTNQVNRLKFENQQLKNQLGFTLHQHLIVSLENAQLRSESEILTTRLSHLYGALGTTLSP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1291 145 SUPERFAMILY Leucine zipper domain 60 111 IPR046347 GO:0003700|GO:0006355
Prci2g1291 145 CDD bZIP_plant_GBF1 61 111 IPR045314 GO:0003700|GO:0006355
Prci2g1291 145 MobiDBLite consensus disorder prediction 38 54 - -
Prci2g1291 145 FunFam BZIP transcription factor 58 109 - -
Prci2g1291 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 104 IPR004827 GO:0003700|GO:0006355
Prci2g1291 145 MobiDBLite consensus disorder prediction 55 72 - -
Prci2g1291 145 Coils Coil 83 103 - -
Prci2g1291 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Prci2g1291 145 Pfam bZIP transcription factor 60 104 IPR004827 GO:0003700|GO:0006355
Prci2g1291 145 MobiDBLite consensus disorder prediction 36 80 - -
Prci2g1291 145 Gene3D - 58 110 - -
Prci2g1291 145 SMART brlzneu 56 127 IPR004827 GO:0003700|GO:0006355
Prci2g1291 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 41 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1291 Prci-Chr2 9624938 9625730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1291 44 135 bZIP Transcription Factor Family AT2G18160 45.652 3.94e-21 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci2g1291 bZIP_1 3.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1291 - - gmx:102668006 160.229