Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1283 ATGCTGCTTCACCAGAGAAACTCTTTGCTGAGATCTAATACCTCACCTCTTTCCGATTCTCAAATGCTCACTTTCTCTTCTCCCAAATCCGAGTCTCAGTTAACGGACAAGGCCTCCCCGAATGCCGCATTGCCCTTTTCTTATCACCAACTAGCTGGTTACACCAGGAATACAGGTTACGGTTCTGGAGGCATGCACGGGGTTTTAACAACCAGAGGGCCATTTACTCCGTCCCAGTGGATGGAGCTGGAACACCAGGCCTTGATCTACAAGTATATAACTGCAAATATGGCCGTACCTTCTGATCTCCTCATCCCTATCAGAAAAGCTCTCGATTCTGCTGGCTTCAGTAACTTTTCCAACGGATTTCTGAGATCCAATACACTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAGCAACACTGATCCTGAACCGGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCCAGAGATGCCGTTGTGGACCAGAAGTATTGTGAGCGCCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCTCTGGCGCCACCACTACCAATAATTCCTCAAAGCTCATCCCTAATGCTTCATCCTCTGCCTCAGTGGTGGTGCCAGGCAACTCCGCGTCCAATACCCTTTCCTTTGCCCATCATCAATCCAAGAATTTGCAGACTCTTTCATCTCATACTTCTGCTCCAACCAACATCGACAGAATGTTTATGAACGGCAAGGAGAATTCTAGTGAAAGAGCGCAGGACGGTTCTGCTCTTCCAATGCTGCCTCCCACCCTTGATTTGAAGCCCAAGGAAAACCCTTTTATGATACAAAAGGAGCAAATCCCGTACGAAGAATCGTCAAGGAATGAGTTTGGGCTTGTCACTTCTGATTCCCTACTTAACCCTTCTCATAAAAGCTTTGGTTCTTCACAAAACCCCTCTTACAGAGACACAGAGTCACAACAATCCCTTCGGCATTTCATGGATGACTGGCCCAAGCTTGACATGCAATCAGATAGGACCCAGCTTTCGATATCTATCCCCATGGCCTCCTCAAATTTCATGTCATCCACTTCCTCTCCCACCAATGAAAAAGTCACATTGTCACCTCTTCGACTATCAAGGGAGCTAGATCCAATTCAAATGGGTTTGGGGGTGGGAATTGGTCTGAACGAATCAAGCAATAGGCAGGCAAATTGGATTCCAATTGCTTGGGAAAGTTCTATGGGAGGTCCTCTTGGTGAAGTTCTTCATCTTAGTAACAATACAAGTGATTGCTCCAAGAACTCATCTGCTCTTAACCTCATGACAGATGGGTGGGATAAGAGTTCTTCAATAGGTTCATCTCCTACGGGGGTTTTGCATAAGACAGCGTTTGGATCTGTTTCCAATAGCAACTCAGGGAGCAGTCCACAGGCTGAGAATAATAAAGGACTCGAAGGGGCCAGCTTGTGCAATGACCTGCTTGGTTCCACCCTCGGCAATTCCTCCTCTTTGCCCAACCTGTAA 1545 0.477 MLLHQRNSLLRSNTSPLSDSQMLTFSSPKSESQLTDKASPNAALPFSYHQLAGYTRNTGYGSGGMHGVLTTRGPFTPSQWMELEHQALIYKYITANMAVPSDLLIPIRKALDSAGFSNFSNGFLRSNTLGWGGFHLGFSSNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVSGATTTNNSSKLIPNASSSASVVVPGNSASNTLSFAHHQSKNLQTLSSHTSAPTNIDRMFMNGKENSSERAQDGSALPMLPPTLDLKPKENPFMIQKEQIPYEESSRNEFGLVTSDSLLNPSHKSFGSSQNPSYRDTESQQSLRHFMDDWPKLDMQSDRTQLSISIPMASSNFMSSTSSPTNEKVTLSPLRLSRELDPIQMGLGVGIGLNESSNRQANWIPIAWESSMGGPLGEVLHLSNNTSDCSKNSSALNLMTDGWDKSSSIGSSPTGVLHKTAFGSVSNSNSGSSPQAENNKGLEGASLCNDLLGSTLGNSSSLPNL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1283 514 MobiDBLite consensus disorder prediction 1 37 - -
Prci2g1283 514 ProSiteProfiles QLQ domain profile. 74 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci2g1283 514 Pfam WRC 144 186 IPR014977 -
Prci2g1283 514 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Prci2g1283 514 MobiDBLite consensus disorder prediction 233 252 - -
Prci2g1283 514 PANTHER GROWTH-REGULATING FACTOR 5 21 365 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci2g1283 514 MobiDBLite consensus disorder prediction 170 207 - -
Prci2g1283 514 MobiDBLite consensus disorder prediction 471 491 - -
Prci2g1283 514 SMART QLQ_2 73 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci2g1283 514 MobiDBLite consensus disorder prediction 258 281 - -
Prci2g1283 514 MobiDBLite consensus disorder prediction 308 333 - -
Prci2g1283 514 MobiDBLite consensus disorder prediction 191 207 - -
Prci2g1283 514 Pfam QLQ 74 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci2g1283 514 MobiDBLite consensus disorder prediction 471 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1283 Prci-Chr2 9591315 9594878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1283 3 472 GRF Transcription Factor Family AT2G22840 43.227 2.83e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci2g1283 WRC 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1283 - - pcin:129304243 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1283 2 9591315 9594878 Prci2g1283 2 9591315 9594878 ECH