Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1274 ATGAAGTCCATCAATGACAGCAGGAGCAACGATGGGAGTGGGAATAATAATAGTAATGGTCAAAACTGGTTGGGGTTTTCTCTGTCACCCCACATGAAAATGGAGGTTACTTCTGGCCCACCCCTTCATCATCACGATTATCATCAGTATCATCATCAACCTCAAGCTTCTACTGCTGCTGTTTCTAGCTCTGTTCCGACAACCTTCTGTCTGTCACCTTCTCAGCTCAGCAGTTACGGGATATGTTATGGTGCGGCGGAGAACCCAGGCTATCATTCTCCATTGACCGCCATGCCTCTCAAGTCCGATGGCTCGCTTTGTATAATGGAAGCCCTGTCTCGATCACCAACTCAAGTGATGATGCCGAATTCGTCTCCGAAACTGGAGGACTTTCTAGGTGGTGCAACTATGGGGACTCATGATGCAATGGCTCTGAGCCTCGACAGCATCTACTATGGCAACCAGGCTGCACAGGCTCAATCCCATAGAGACCATTCTCTTGATTTTCTTTCGGAGCCTTTCAGACAGCAAGACCCCATATCTGTCCAGTCACATCCTTATTATTCTGGAGCTGCTTGCCATGCTGTTTATCCATCACCATTGGAGCAACAAAGCAAGGACCCCCAATTGCAACCAATGTCCGAGGAAGGCATGACTTGCCTGAAAAACTGGGTGGCTTCCGGCAGGGACTATTCTGCTCAACAAGGTTTGGAGGAGAAGAAAAATGGAACCTTAGAAAATGACAGTGGAGCTTCTGGGTCCGTTGGTAAAGTTGGGTGTGGAGATTTACAGTCCCTTAGTTTATCCGTGAGCCCTGGCTCACAATCTAGCTGTGTAAATGCTCCACAGCGGATTTCCCCCTCTTCGACTGACGTGGTGGCAATGGAAGCCAAGAAGAGAGGGCCAGGGAAGTTGGGCCAGAAACAGCCGGTGCACAGGAAATCGATCGACACTTTTGGCCAAAGAACGTCTCAGTACCGAGGCGTCACAAGGCACAGATGGACCGGTAGATATGAAGCGCATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACCAGGAAAGGAAGACAAGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTCAAGTACTGGGGAGCCTCAACCCATATTAACTTTCCGTTGGAAAATTACCAGGTTGAACTTGAAGAAATGAAGAACATGAGCAGGCAAGAATACGTTGCCCACTTGAGAAGAAAAAGCAGTGGTTTTTCCAGAGGGGCTTCAATGTATAGAGGAGTGACGAGGCACCATCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCAGGAAACAAGGACCTCTATCTGGGAACATTCAGCACTCAGGAGGAAGCAGCTGAAGCGTATGACATAGCTGCAATCAAGTTTCGAGGCGTGAATGCAGTTACTAACTTCGACATATCAAGATACGATGTGGAAAGGATCATGGCGAGCAACACCCTTCTCGCTGGTGAGCTGGCTCGACGAAACAAAGATAGCGAGCCAAGAATAGAAGCCATGGAGTACAATGTAGCCTCGAACCAGAGCAATGGGGTAGCGGTTCAAGCTCAAAGGAACGACAACGGCAACGGCTCGGAGTGGAAAATGTATCATCCAAACAGCTGTGAGCAGAAAACCGTGAACTGCGGAAATTACAGGAATTCAGCCATATCTGTGGCCCTACAGGATCTCATTGGGATTGACTCAGAAAGCTCGGGTCAGGCCATGCTGGAGGACACTACCAAGATAGGCACTCATTTTTCAAACCCAACCTCGCTGGTCACGAGTCTGAGCAGCTCAAGAGAGGGAAGCCCGGATAAAACTGGTCCCACCATTCTGTTTCCAAAGCCTCCTCCAATGGCTTCAAAGATTGTTGGCCCCATAGGTAGTGGAGTTAGCTCGTGGTTCCCTTCAGCAGCTTCTCAAACGTTGAGGCCAGCTCCTGCTCTTTCGATGTCTCACTTGCCAGTTTTTGCAGCTTGGAACGATGGTTGA 2022 0.4901 MKSINDSRSNDGSGNNNSNGQNWLGFSLSPHMKMEVTSGPPLHHHDYHQYHHQPQASTAAVSSSVPTTFCLSPSQLSSYGICYGAAENPGYHSPLTAMPLKSDGSLCIMEALSRSPTQVMMPNSSPKLEDFLGGATMGTHDAMALSLDSIYYGNQAAQAQSHRDHSLDFLSEPFRQQDPISVQSHPYYSGAACHAVYPSPLEQQSKDPQLQPMSEEGMTCLKNWVASGRDYSAQQGLEEKKNGTLENDSGASGSVGKVGCGDLQSLSLSVSPGSQSSCVNAPQRISPSSTDVVAMEAKKRGPGKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGASTHINFPLENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDSEPRIEAMEYNVASNQSNGVAVQAQRNDNGNGSEWKMYHPNSCEQKTVNCGNYRNSAISVALQDLIGIDSESSGQAMLEDTTKIGTHFSNPTSLVTSLSSSREGSPDKTGPTILFPKPPPMASKIVGPIGSGVSSWFPSAASQTLRPAPALSMSHLPVFAAWNDG 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1274 673 ProSiteProfiles AP2/ERF domain profile. 424 482 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 SMART rav1_2 424 488 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 SMART rav1_2 325 394 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 Pfam AP2 domain 325 380 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 Pfam AP2 domain 425 474 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 MobiDBLite consensus disorder prediction 1 24 - -
Prci2g1274 673 CDD AP2 423 484 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 Gene3D AP2/ERF domain 424 484 IPR036955 GO:0003700|GO:0006355
Prci2g1274 673 Gene3D AP2/ERF domain 324 390 IPR036955 GO:0003700|GO:0006355
Prci2g1274 673 MobiDBLite consensus disorder prediction 271 292 - -
Prci2g1274 673 MobiDBLite consensus disorder prediction 601 627 - -
Prci2g1274 673 SUPERFAMILY DNA-binding domain 324 390 IPR016177 GO:0003677
Prci2g1274 673 SUPERFAMILY DNA-binding domain 423 484 IPR016177 GO:0003677
Prci2g1274 673 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 118 553 - -
Prci2g1274 673 CDD AP2 324 388 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 PRINTS Ethylene responsive element binding protein signature 464 484 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 PRINTS Ethylene responsive element binding protein signature 326 337 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 MobiDBLite consensus disorder prediction 601 615 - -
Prci2g1274 673 MobiDBLite consensus disorder prediction 271 290 - -
Prci2g1274 673 FunFam AP2-like ethylene-responsive transcription factor 423 484 - -
Prci2g1274 673 ProSiteProfiles AP2/ERF domain profile. 325 388 IPR001471 GO:0003700|GO:0006355
Prci2g1274 673 FunFam AP2-like ethylene-responsive transcription factor ANT 324 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1274 Prci-Chr2 9545084 9549384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1274 11 509 AP2-EREBP Transcription Factor Family AT4G37750 52.453 5.91e-156 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Prci2g1274 AP2 1.3e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1274 K09285 - qsa:O6P43_015953 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1274 2 9545084 9549384 Prci2g1274 2 9545084 9549384 ECH