Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1270 ATGGCAGATCAGTACACTCTTGGTTGGATCTTTTGCTCTGGTTTGCTCGCCTTGGTTGCCCTCTACAATTTGGTCTTTGCCAGGAAAAGCCGCATTGTTTCTGCCGTCGCTTCACCTCAGTGCATGGCTAGCATAACCACTGCTGCCGGAGAATGCAGATCGATTGACAGAAGCAGCGGTAAGATTGACGTCATTATCGTCGGAGCTGGGGTTGCTGGCTCTGCCCTGGCGCACACTCTTGGCAAGGATGGACGGCAAGTACATGTCATAGAAAGAGATTTGAGTGAGCCCGACCGAATTGTTGGGGAGTTGCTACAACCTGGGGGCTATCTCAAACTAATTGAGCTGGGGCTTGAAGATTGTGTGCAGGAAATTGATGCTCAGCAAGTGTTTGGTTATGCTCTGTACAAGGATGGAAAAAATACTCGACTCCCTTATCCATTGGAGAAGTTTCACTCAAATGTTTCTGGAAGAAGCTTTCACAATGGGCGTTTTATTCAGAGGATGAGGGAGAAGGCTGCCTCCCTTCCCAATGTACAATTGACGGAAGGAACAGTTACTTCCCTACTTGAAGAGAATGGGACAATTAGAGGTGTGCATTACAAGACTAAAGATGGCCAAGAATTTTCAGCTTATGCTCCTCTTACCATTGTTTGTGATGGGTGTTTTTCAAACTTGCGTCGTTCTCTTTGTAATCCCAAGGTAGAAGTTCCCTCCTGTTTTGTTGGTTTAATTTTGGAAAATTGTGAACTTCCATATGCAAACCATGGCCATGTTATCCTAGCAGATCCTTCGCCAATTTTGTTTTATCCTATAAGTAGAACGGAGATTCGCTGTCTCGTTGATGTACCTGGTCAGAAGGTTCCTTCAATTTCGAACGGTGAAATGACTAGGTATTTGAAGACAATGGTAGCTCCACAGATCCCATCTGAGCTTCATGATGCCTTTATAGCCGCGGTGGAGAAAGGCAATGTGAGGACAATGCCAAACAGAAGCATGCCGGCAGCCCCTTATCCTACTCCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGCCATCCTCTAACTGGGGGAGGAATGACTGTGGCATTGTCTGATATAGTTGTGCTCCGGAATCTTCTCAAGCCTTTGCGTGACCTAAACGATGCATCCACGCTTTGCAAATATCTCGAGTCCTTTTATACATTGCGGAAGCCAGTGGCATCCACTATAAATACGTTGGCGGGAGCCCTGTACAAGGTATTTAGTGCATCTCCTGACGAGGCGAGGAGTGAAATGCGCCAAGCATGCTTTGACTATTTAAGTCTTGGAGGTGTATTCTCGGAAGGACCAATTTCGTTACTTTCTGGATTGAATCCCCGCCCCTTGAGCTTGGTTCTCCATTTCTTCGCTGTTGCAATATACGGTGTTGGCCGTTTGCTGATTCCATATCCCTCGCCCAATCGGGTTTGGATCGGAGCACGATTGATATCCAGTGCTTCAGGAATAATCTTCCCCATAGTCAAGGCTGAAGGAGTTCGCCAGATGTTCTTCCCTGCAACTGTCCCAGCTTATTACAGAACACCTCCGTCTAAACAGGAGTGA 1587 0.4694 MADQYTLGWIFCSGLLALVALYNLVFARKSRIVSAVASPQCMASITTAAGECRSIDRSSGKIDVIIVGAGVAGSALAHTLGKDGRQVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVQEIDAQQVFGYALYKDGKNTRLPYPLEKFHSNVSGRSFHNGRFIQRMREKAASLPNVQLTEGTVTSLLEENGTIRGVHYKTKDGQEFSAYAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENCELPYANHGHVILADPSPILFYPISRTEIRCLVDVPGQKVPSISNGEMTRYLKTMVAPQIPSELHDAFIAAVEKGNVRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRDLNDASTLCKYLESFYTLRKPVASTINTLAGALYKVFSASPDEARSEMRQACFDYLSLGGVFSEGPISLLSGLNPRPLSLVLHFFAVAIYGVGRLLIPYPSPNRVWIGARLISSASGIIFPIVKAEGVRQMFFPATVPAYYRTPPSKQE 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1270 528 FunFam Squalene monooxygenase 2 56 436 - -
Prci2g1270 528 Gene3D - 57 441 IPR036188 -
Prci2g1270 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 212 227 - -
Prci2g1270 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 340 355 - -
Prci2g1270 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 355 371 - -
Prci2g1270 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 63 85 - -
Prci2g1270 528 Pfam Squalene epoxidase 213 484 IPR013698 GO:0004506|GO:0016020|GO:0050660
Prci2g1270 528 PANTHER SQUALENE MONOOXYGENASE 51 524 IPR040125 GO:0004506|GO:0016126
Prci2g1270 528 SUPERFAMILY FAD/NAD(P)-binding domain 62 436 IPR036188 -
Prci2g1270 528 Pfam NAD(P)-binding Rossmann-like domain 66 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1270 Prci-Chr2 9453191 9457439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1270 44 528 Miscellaneous Gene Families AT1G58440 78.395 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1270 K00511 - qsa:O6P43_015949 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1270 2 9453191 9457439 Prci2g1270 2 9453191 9457439 ECH