Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1268 ATGAAGGATGACGCAGATGATCGAAAACAGGATAATCCATGGCCCTCATCAAATGCGTCCTTTCAGGGGAAGCCCGAGCAAGATATGAAGCTTTGGGGAGTTTTCCTCTTTGGCTTGATAGGTGCCACTGCCACAACCTTCGCCGTTAGTCAGCTGCGGAGGACTGTTGATTGGTTCTATGCCCAGATGTCCAGATCTCAATCACCATGGAAAGGAGGGACAGGCAATTCCTTTCGGTCGGCTTTTCAGGAAGAAGCATGGAAAAGGTACAATAAGCGGCTCCAAGAAGAGTATGAGGAGGAAATGGCAAGAGTGGAACGTATAAGGCGCATGCAAAGTGTGTTTAACAGGGAAAGGAATAAGTACAAAAGAAGCTATGAGAACTGGGGTGATTGTGGTCAAGATGCACATCACCAACATTTCCAGAGAGATGATTGGTATTGGAAGACCGGCTCATCCTATAGAGATTGGAGGACGAATTATCGAGAAGCTCCAAGGGAAACTGGAAGTTATTCATTGTCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAACAACACCGTATACTGATGCAGAGATCAAGACAGCATTTAGAACCAAGGCAAAGGAGCATCATCCTGATCAGAACCAGGATAATAGAGAGGCTGCAGAGGCAAAATTCAAAGAGGTGGTGAATTCTTACGAAACCATAAAAAAAGAAAGAGCGAGCCTGAGCTGA 723 0.455 MKDDADDRKQDNPWPSSNASFQGKPEQDMKLWGVFLFGLIGATATTFAVSQLRRTVDWFYAQMSRSQSPWKGGTGNSFRSAFQEEAWKRYNKRLQEEYEEEMARVERIRRMQSVFNRERNKYKRSYENWGDCGQDAHHQHFQRDDWYWKTGSSYRDWRTNYREAPRETGSYSLSHHYSVLGLDRFRTTPYTDAEIKTAFRTKAKEHHPDQNQDNREAAEAKFKEVVNSYETIKKERASLS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1268 240 CDD DnaJ 176 233 IPR001623 -
Prci2g1268 240 Coils Coil 91 111 - -
Prci2g1268 240 SUPERFAMILY Chaperone J-domain 171 235 IPR036869 -
Prci2g1268 240 ProSiteProfiles dnaJ domain profile. 175 237 IPR001623 -
Prci2g1268 240 Gene3D DnaJ domain 169 238 IPR036869 -
Prci2g1268 240 PRINTS DnaJ domain signature 217 237 IPR001623 -
Prci2g1268 240 PRINTS DnaJ domain signature 199 214 IPR001623 -
Prci2g1268 240 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 237 - -
Prci2g1268 240 MobiDBLite consensus disorder prediction 201 220 - -
Prci2g1268 240 SMART dnaj_3 174 237 IPR001623 -
Prci2g1268 240 Coils Coil 215 235 - -
Prci2g1268 240 Pfam DnaJ domain 176 235 IPR001623 -
Prci2g1268 240 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1268 Prci-Chr2 9436157 9439794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g1268 176 232 Miscellaneous Gene Families AT5G49580 45.614 2.85e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1268 - - cave:132190178 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1268 2 9436157 9439794 Prci2g1268 2 9436157 9439794 ECH