Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01981 ATGTCACTGCCGTGTGTGTGTCCTGTCATCTCATATTTGCATTTTCGTGTAATGTTTCTGTTGTTGTTGGTGGCAGTGGTTTCATTGGTTTTGGAGAAACAGCAAAAGAGGGGTTTCGTTTCAGAGAGAAAAATGAAGTACGTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCAAGCAGTATTGGCGTGCTCCTTCAGGCCTGCGGCTTTCGAGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGAACAATGTCTCCATTTGAACATGGGGAAGTGTTTGTTTTAGATGATGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCCTGGACCTCAAATTAACTCGTGACAATAATATCACAACCGGAAAAATTTACCAGTCTGTTATTGCAAAGGAGAGAAGAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATCCAAGAATGGATAGAGCGTGTGGCACAGATACCAGTTGATGGAAAAGAAGGCCCAGCTGATGTCTGTGTCATTGAGTTGGGTGGAACTATTGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGAGTAGGCCCCGGAAACTTCTGTTTGGTTCATGTCAGCCTTGTCCCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTCCGCCAACTTAGAGGGTTAGGGTTGACTCCAAATCTTCTTGCTTGTCGCAGTTCAAAGGAACTTGATGACAATGTTAAGGAAAAACTTTCTCAATTTTGTCATGTTCCGTCTTCAAGCATACTTACTCTCTATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGACCAGAAGGCACATGAGGCAATCCTTAAAACATTAAACCTGCGAGGTGTTGCTACAGAGCCCAATTTTAAGGAGTGGATTGCAACAACAAAAGTATATGACAAATTTCATGAATCTGTTAGAATTGCAATGGTGGGAAAATATACAAATCTTTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCTGTTGCCTGCAATCGTAAGCTTGTTGTTGACTGGGTTCCTGCTGAAAATCTTGAAGATGATACCTCTAAGGAGGATCCTGATGCACATAAAGCTGCTTGGGCTCTTTTGAAGGGTGCTAATGGGATTCTAGTTCCGGGAGGATTCGGTGATAGAGGAGTGCAAGGAAAAATTCTTGCTGCCAAGTATGCTCGAGAAAATAGTGTTCCATTTCTAGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCTAATAGCACTGAATTTGATCCCAAGACTAAAAACCCATGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACCATGCGTCTCGGTTCAAGGAGAACTTACTTTCACGTTGCTGACTGCAAATCGGCCAAGTTGTATGGCAATGCACACTTTGTTGATGAGCGACATCGGCACCGATACGAGGTTAATCCTGACTTGATATCACAACTTGAGAGTGCTGGTCTGTCTTTTGTTGGCAAAGATGAAACAGGGAAGCGCATGGAGATAGTTGAATTTCCTATCCATCCTTTCTTCATTGGTGCTCAATTTCACCCCGAGTTTAAGTCAAGACCAGGGAAACCTTCTCCATTGTTCCTAGGGTTAATAACAGCAGCATGTGATAGGACAGTTGTGGCAGCAAGCAAAGGGTATAACACCAAGCTACCAAAAGGGATACTTGGTTCACACTCACCAATGTTGAAAGCACACAATGGAAATGGGTTCAAGTCTCCCAATAGTTCCTTAAATGGTGTATATACAAGTACAACTGCGAATGGGGTGTGTGTGGATGGTAGCTGTTAA 1956 0.4294 MSLPCVCPVISYLHFRVMFLLLLVAVVSLVLEKQQKRGFVSERKMKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIAKERRGDYLGKTVQVVPHITDAIQEWIERVAQIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKEKLSQFCHVPSSSILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLRGVATEPNFKEWIATTKVYDKFHESVRIAMVGKYTNLSDAYLSVLKALLHASVACNRKLVVDWVPAENLEDDTSKEDPDAHKAAWALLKGANGILVPGGFGDRGVQGKILAAKYARENSVPFLGICLGMQIAVIEFSRSVLGLHDANSTEFDPKTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFHVADCKSAKLYGNAHFVDERHRHRYEVNPDLISQLESAGLSFVGKDETGKRMEIVEFPIHPFFIGAQFHPEFKSRPGKPSPLFLGLITAACDRTVVAASKGYNTKLPKGILGSHSPMLKAHNGNGFKSPNSSLNGVYTSTTANGVCVDGSC 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01981 651 FunFam CTP synthase 45 336 - -
Phco9g01981 651 Pfam CTP synthase N-terminus 46 316 IPR017456 GO:0003883|GO:0006221
Phco9g01981 651 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 343 596 - -
Phco9g01981 651 Pfam Glutamine amidotransferase class-I 353 588 IPR017926 -
Phco9g01981 651 FunFam CTP synthase 339 602 - -
Phco9g01981 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 316 IPR027417 -
Phco9g01981 651 NCBIfam CTP synthase (glutamine hydrolyzing) 44 589 IPR004468 GO:0003883|GO:0006221
Phco9g01981 651 Gene3D - 38 336 IPR027417 -
Phco9g01981 651 SUPERFAMILY Class I glutamine amidotransferase-like 341 592 IPR029062 -
Phco9g01981 651 Hamap CTP synthase [pyrG]. 45 594 IPR004468 GO:0003883|GO:0006221
Phco9g01981 651 Gene3D - 338 601 IPR029062 -
Phco9g01981 651 CDD CTPS_N 46 312 IPR017456 GO:0003883|GO:0006221
Phco9g01981 651 PANTHER CTP SYNTHASE 45 593 IPR004468 GO:0003883|GO:0006221
Phco9g01981 651 CDD GATase1_CTP_Synthase 342 587 IPR033828 GO:0003883|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01981 Phco-Chr9 44735579 44741543 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01981 9 44735579 44741543 Phco9g01981 9 44735579 44741543 ECH
Phco10g00394 10 3559495 3566296 Phco9g01981 9 44735579 44741543 PCT
Phco9g01981 9 44735579 44741543 Phco10g00456 10 4271592 4276791 PCT