Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01964 ATGGAAAGAATGTTCCCTCCTAAGAAGCCTTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGTGACTCAGGGCTTGTCCTCACCACAGACCCTAAGCCACGTCTTCGTTGGACTGTTGAACTGCATGAACGCTTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAGACAATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTCAGACTTGGAAAGCAGCCCCACAAGGATTTCAATGAACACTCTATTAAGGATGGCATGAGAGCTTCTGCTTTAGAACTTCAGAGAAATATTGGCTCCTCTTCTGCCATGATTGGTCGCAACATGAACGAGATGCAAATGGAAGTGCAAAGAAGATTGCATGAACAACTAGAGGTTCAGAAAAACCTTCAGCTGAGGATTGAGGCTCAAGGAAAATACATGCAGAGTATATTGGAGAAGGCTTATCACACACTTGCTGGAGAAAACATGGGCACAAGCATGAAGGGTATGGGAGGAGCTCAAGGAAGCACTGAGATGGGGGTGATGAAAGACTTTTGTTCTCTGAATTACCCTTCTTTTCAAGATCTTAACTTGTATGGTGGTAGTGGTGAGCAACTTGATGGGTTTATGGGATCAAACAATGAGGGTGTGTTTGAGGGAAAGAAGAGGCTTTACCCCTACAGTGGAAGTGGGAAGAGTCCATTGATTTGGTGTGATGATCTCAGGCTTCAAGATTTGGGAACAACTTCATCATGCATTAGCCCTGAAGAGGACCCTTTCAAAGGTGATCATCATCATCATCACAAGGTTCAGATTTCACCACCATCAATGGATAGTGATCCCATGTCAGAGATCTATGACACAAAGCCATTAATGGTACTCCATGGAGAAAGTGTAGGTAATCACAAGAAATTTGATGCTTCTTTGAAGCTAGAAAGGCCATCACCACAAAGATCACCACTTCAACCAGAAAGGAATAGTCCTATGATCAATGCTACTTCCATGACACAAGGGTTTTGA 1059 0.4419 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNEHSIKDGMRASALELQRNIGSSSAMIGRNMNEMQMEVQRRLHEQLEVQKNLQLRIEAQGKYMQSILEKAYHTLAGENMGTSMKGMGGAQGSTEMGVMKDFCSLNYPSFQDLNLYGGSGEQLDGFMGSNNEGVFEGKKRLYPYSGSGKSPLIWCDDLRLQDLGTTSSCISPEEDPFKGDHHHHHKVQISPPSMDSDPMSEIYDTKPLMVLHGESVGNHKKFDASLKLERPSPQRSPLQPERNSPMINATSMTQGF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01964 352 MobiDBLite consensus disorder prediction 270 286 - -
Phco9g01964 352 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 185 IPR044848 GO:0003700
Phco9g01964 352 MobiDBLite consensus disorder prediction 1 20 - -
Phco9g01964 352 Pfam MYB-CC type transfactor, LHEQLE motif 131 169 IPR025756 -
Phco9g01964 352 FunFam Myb family transcription factor 34 92 - -
Phco9g01964 352 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Phco9g01964 352 Gene3D - 34 92 - -
Phco9g01964 352 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Phco9g01964 352 MobiDBLite consensus disorder prediction 332 352 - -
Phco9g01964 352 MobiDBLite consensus disorder prediction 270 293 - -
Phco9g01964 352 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Phco9g01964 352 MobiDBLite consensus disorder prediction 320 352 - -
Phco9g01964 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01964 Phco-Chr9 44504421 44507902 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco9g01964 Myb_DNA-binding 4.7e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01964 9 44504421 44507902 Phco9g01964 9 44504421 44507902 ECH
Phco10g00488 10 4897812 4900225 Phco9g01964 9 44504421 44507902 PCT