Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01760 ATGGAAGTGGGAAAATTGAATGGCATGAACTTTTGGAAGAAGCAGAACCAAGTTTCAGAGTTGTGGCAGTTGCACAAGCAACAAGAAGAGGAAAATCTCAACACCAACACCAACACCAACACCAACAAGGCTCTGACTCTGGATCCTCACAGGAATCACCATCATCATCATCATCATCATCACCTTCATCTTCAGCATCAATCTCATCATCAAAATCAGGTCTTCAACACAACACATGTAACAACCGAGGAGGAAGAAGAAGAAGGAGAAAAGCAACAAGACCACCAATCTCATACCCACCAATTTCAACACCTCCATCATCTACATCATCATCAACAACGACAAGATGAACAACAATCTTACACAGGTTTAGACACGGAGCTCTTAAACTCACTTCAGCTACCAAAGAAACGCTCTTTCCTCCCTCCTCTTCCACCACCGCCTTCCACGCTTACTTCAACCGAACATGCGAGAAAGATGGGAGAATCACAGAACCACCTTCTCCTTCACCAAGCAGCAACACCGTCGAGATCGACGATGAGAGGCGGCGGCGTCGGCGAGATCGTGGAGGTGCAAGGCGGCCACATTGTCCGCTCCACCGGGCGGAAGGACCGCCACAGCAAGGTCTGCACTGCCAAAGGCCCCAGAGACCGCCGTGTGCGCCTGGCGGCTCACACCGCCATCCAATTCTACGACGTCCAGGACCGCCTCGGCTATGACCGCCCCAGCAAGGCCGTCGACTGGCTCATAAAAAAAGCTAAGGCGGCCATCGACGAGCTCGCAGAGCTCCCACCGTGGAACCCGACGGCCACGTCAATGCAACCGCCTCAGCAGCAGGAAATCGTCCTCCGCGACAACAAGTCTCTCTCTATAGAAGACCCAATAGCCTTTGGCAGCCGTGGCGAGAGCAACGTTGTCTCCGGCGCTACCAGAGTTCCAGAACAATTTTCTCACCAACAGTTGGAGAGTGAAAATGCTAACATAAGCAACAGCAAGTACAGCAGTGGTTCTGGTTTTCTGCCACCGTCTCTGGACACTGATAACATTGCTGAGACAATCAAGACTTTCTTTCCCGTCGAAGCTACCACGACGTCATTTCAGAGTTACCCTCCGCCAGCACCGGATTTGAGGCAGCAAGATCTTCGTCTGTCGTTGCAGTCATTTCAGGACCCTATCATGCTTCAGCAAGAGCCTCAGAGCCACCACGAGCCTGTGCTATTCGCCGGAGCGACGCTCGGCTTCGATGGCGGTTCCGGCTGGTCGGAGAACCACCACCACCACTCGGAGGAGCATAGGTTTCTCTTTGGTGGCAACAGTGGCCATGGCGGTGGGTTTGTGTTCAACACGCCGGCGCCGGCGTTTGGCCAATTTTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCAGTTCGTGCTTGGATAGACCCTTCGGTCGATCACCACCACCACAACCATCACTACCTCTCGCCGCTGATCCACCAGGGCTCTGTCGCTGGCGGCTTCTCCGCCGGTGGTGGATTCGCTGGCTTCCGCATTCCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTATCCGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1623 0.5367 MEVGKLNGMNFWKKQNQVSELWQLHKQQEEENLNTNTNTNTNKALTLDPHRNHHHHHHHHHLHLQHQSHHQNQVFNTTHVTTEEEEEEGEKQQDHQSHTHQFQHLHHLHHHQQRQDEQQSYTGLDTELLNSLQLPKKRSFLPPLPPPPSTLTSTEHARKMGESQNHLLLHQAATPSRSTMRGGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPPWNPTATSMQPPQQQEIVLRDNKSLSIEDPIAFGSRGESNVVSGATRVPEQFSHQQLESENANISNSKYSSGSGFLPPSLDTDNIAETIKTFFPVEATTTSFQSYPPPAPDLRQQDLRLSLQSFQDPIMLQQEPQSHHEPVLFAGATLGFDGGSGWSENHHHHSEEHRFLFGGNSGHGGGFVFNTPAPAFGQFFSQRGPLQSSNTPSVRAWIDPSVDHHHHNHHYLSPLIHQGSVAGGFSAGGGFAGFRIPARIQGEEEHDGVSDKPSSASSDSRH 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01760 540 ProSiteProfiles TCP domain profile. 202 260 IPR017887 -
Phco9g01760 540 Pfam TCP family transcription factor 201 324 IPR017887 -
Phco9g01760 540 MobiDBLite consensus disorder prediction 517 540 - -
Phco9g01760 540 MobiDBLite consensus disorder prediction 80 101 - -
Phco9g01760 540 MobiDBLite consensus disorder prediction 49 67 - -
Phco9g01760 540 MobiDBLite consensus disorder prediction 33 120 - -
Phco9g01760 540 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 182 465 IPR005333 GO:0003700
Phco9g01760 540 MobiDBLite consensus disorder prediction 516 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01760 Phco-Chr9 41460377 41462085 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco9g01760 TCP 2.4e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01760 9 41460377 41462085 Phco10g01137 10 33167501 33168544 PCT