Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02887 ATGAAAGTGTGCGTTGCTGCGGCTGCGGCCGTCACTCTGTTAGCGGCGTGGCTGATTCTCGTCGACGCGCGGTTTGTGGTGGAGAAGAGCAGCATAGCCGTTCTTTCGCCGCACAAGATGCGGACTAAACGCGACGGCGCTATCGGTAACTTCGGCCTTCCTGACTACGGAGGATTCATCGTTGGCTCTGTGATGTATCCCGCCAAAGGCTCCCACGGTTGTCAGGTCTTCGACGGAGATAAGCCTTTCAAACTTCAGTCCCATCGTCCTACTATTGTTCTCCTTGATCGCGGAGAGTGTTATTTTGCCTTGAAGGTTTGGCATGCACAATTAGCTGGTGCTGCGGCAGTTTTGGTGACTGACAGCGTTGATGAATCTCTTATAACCATGGATTCTCCGGAGGAGAGCTCTGATGCAGATGGATACATAGAAAAGATTGTGATTCCATCAGCTCTGATAGAGAAATCCTTTGGTGATTTGTTGAAGGACGCTTTGAATAACAAAGATGAAGTTTTGCTGAGAATTGACTGGAGAGAGTCAGTACCTCACCCTGATAACAGAGTTGAGTATGAGTTTTGGACCAACAGCAATGATGAATGCGGAGCTCGTTGCGACGAACAGATGAATTTCGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGAGGTTACACCTTGTTCACTCCACACTATATAACTTGGTTTTGTCCACCGCCCTTCATTCTTAGCAGTCAGTGTAAATCGCAGTGTATAAACCATGGGAGATATTGTGCCCCGGATCCCGAGAAGGATTTTGGAGGGGGCTATGAAGGAAAGGATGTGGTGTATGAAAATTTGAGGCAGCTGTGTGTCCATAGGGTTGCCAATGAGAGCAACCGTTCATGGGTCTGGTGGGATTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATACAGCAAAGATTGTGCTGAGGAAGTGATGAAATCATTGGATCTGCCTTTGGAGAAAATTAAAAAATGCATGGGTGATCCTGAAGCGGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACAAGTCCAGATCGGTAGGGGATCTCGGGGTGATATCACCATCTTGCCAACATTGGTTTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACTGCTGTACTGAAGGCTGTATGTTCTGGATTTAAGGAGACTACTGAACCTTCAGTTTGCTTAAGTGGAGATGTTGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGCTGGAAAGACACAAAGGCTAACATAACTGCTTGCAAGGATACATTCAGGGGAAGAGTTTGCGAGTGCCCTGTTGTGAACGGTGTTCAGTATAAGGGTGATGGTTATACTACTTGTGAAGCTTTTGGACCTGCAAGGTGTTCTATAAACAATGGTGGTTGTTGGTCAGAAACTAAAAAAGGAGTAACTTTCTCAGCTTGCTCAGACTCCAAGGCAAATGGCTGTCAATGCCCGGTTGGGTTTATTGGGGATGGTAATAAATGCGAAGATGTTGACGAATGTAAGGAACGAAGTGCTTGTCAGTGTGATGGCTGCAGCTGCAAGAACACTTGGGGTAGTTACGACTGTAAATGCAAGGGAAATCTTCTATATATAAAGGAACAAGACGTCTGTATTGAAAGAAGTGGATCACGATTTGGCCGGTTCCTTGCCTTTGTGGTCATAGCAGTTGTTGTGGGCGCTGGTCTAGCTGGTTACGTGTTCTACAAATATAGGCTCCGGTCTTACATGGACTCCGAGATCATGGCTATCATGTCACAATACATGCCACTGGACCAGCAAAATAATGTAGTTCATGCTGAAGCTCAGCCTTTACGACAAGAAGGCACCGTGTAA 1884 0.457 MKVCVAAAAAVTLLAAWLILVDARFVVEKSSIAVLSPHKMRTKRDGAIGNFGLPDYGGFIVGSVMYPAKGSHGCQVFDGDKPFKLQSHRPTIVLLDRGECYFALKVWHAQLAGAAAVLVTDSVDESLITMDSPEESSDADGYIEKIVIPSALIEKSFGDLLKDALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPPPFILSSQCKSQCINHGRYCAPDPEKDFGGGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKRYSKDCAEEVMKSLDLPLEKIKKCMGDPEADVENEVLKNEQQVQIGRGSRGDITILPTLVLNNVQYRGKLERTAVLKAVCSGFKETTEPSVCLSGDVETNECLERNGGCWKDTKANITACKDTFRGRVCECPVVNGVQYKGDGYTTCEAFGPARCSINNGGCWSETKKGVTFSACSDSKANGCQCPVGFIGDGNKCEDVDECKERSACQCDGCSCKNTWGSYDCKCKGNLLYIKEQDVCIERSGSRFGRFLAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAEAQPLRQEGTV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02887 627 SMART egfca_6 513 555 IPR001881 GO:0005509
Phco7g02887 627 Gene3D Laminin 407 463 - -
Phco7g02887 627 Pfam PA domain 62 161 IPR003137 -
Phco7g02887 627 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 9 612 - -
Phco7g02887 627 CDD EGF_CA 513 542 - -
Phco7g02887 627 Gene3D - 22 184 - -
Phco7g02887 627 FunFam Vacuolar-sorting receptor 1 22 184 - -
Phco7g02887 627 FunFam vacuolar-sorting receptor 1 407 463 - -
Phco7g02887 627 Gene3D Laminin 480 552 - -
Phco7g02887 627 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Phco7g02887 627 SUPERFAMILY PA domain 91 171 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02887 Phco-Chr7 47848493 47853637 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02887 7 47848493 47853637 Phco7g02887 7 47848493 47853637 ECH