Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00553 ATGGTAGCCGTCCCCATTCATTTGTGGAGCTTACCAGAACACCGCACCGTCGTTTCCGTGGCCGTGAGGTTCTTAGAAATGTTGGACACCTACGTGTTTGGATGGATCATATGCGCCGCGCTGAGCGTATTTGTGATTCGCAATTTCGTTTTCGCGGGGAAGAAATGTTGCGCGTCGTCGGAGACCGATGCGTCTATGTGCGCCGAAAACATCACTACCGCCGCCGGAGAATGCAGATCGTCAATGCGCGACGGCGAATTTGACGTCATAATTGTCGGAGCTGGCGTCGCTGGCTCCGCTCTGGCTTACACTCTCGGCAAGGATGGACGTCAAGTACTTGTCATTGAAAGAGATCTGAGTGAACCAGACAGAATTGTTGGAGAGTTGCTTCAGCCTGGAGGTTATCTCAAGTTAATTGAGCTGGGACTTGAAGATTGTGTGGAAAAAATTGATGCTCAACAAGTGTTTGGTTATGCTCTTTTCAAGGATGGGAAACACATAAGACTCTCTTATCCGTTGGAAAAGTTTCACTCACATGTTGCTGGCAGAAGCTTTCACAATGGGCGTTTTATTCAAAGGATGAGAGAGAAGGCTGCCTCCCTTCCCAATGTACGACTAGAGCAAGGAACAGTTACTTCCTTACTTGAAGAGAAGGGGGTAATTAAAGGCGTGCAGTACAAAACTAAGGATAGTCAAGAGTTATCAGTTTGTGCACCCTTTACCATTGTTTGTGATGGCTGTTTTTCAAACTTGCGTCGTTCTCTTTGTGATCCTAAGGTAGATGTGCCCTCTTGTTTCGTTGGTCTAGTTTTGGAGAATTGTGAACTTCCTTGTGCAAATCATGGCCATGTCATACTGGGAGAACCTTCGCCAGTTCTGTTTTATCCAATAAGTAGTACAGAAATCCGCTGTCTGGTTGATGTTCCTGGTCAGAAAGTTCCGTCTATTTCCAATGGTGAGATGGCTAAGTATTTGAAGACAGTGATAGCTCCACAGGTTCCGCATGAGCTTCACAACGCATTCATAGCTGCAGTGGACAAAGGCAGCATCAGGACAATGCCAAACAGAAGCATGCCAGCAGCTCCTTATCCTACTCCCGGAGCCCTGTTGATGGGAGATGCATTCAATATGCGCCATCCTCTAACGGGGGGTGGCATGACTGTGGCATTATCTGATATAGTAGTGCTGCGAAATCTTCTTAGGCCTTTGCGTGATCTGAATGATGCACCCAGCCTTTGCAAATACCTTGAATCCTTTTATACCTTGCGAAAACCTGTAGCGTCCACTATAAATACGCTGGCAGGAGCTCTTTACAAGGTTTTTTGTGCTTCACCTGATCCTGCGAGGGCGGAAATGCGCCAAGCTTGCTTCGATTATCTTAGTCTTGGAGGTCAATTCTCGGAAGGGCCAGTCTCTTTGCTTTCGGGATTAAATCCTCGGCCGTTGACCCTGGTTCTCCATTTCTTCGCTGTTGCAACATATGGTGTCGGCCGTTTACTGCTACCATTTCCTTCACCTAAACGGATATGGATCGGACTTCGATTGATTTCTAGTGCATCCGGAATCATCATGCCAATAATTAAGGCAGAAGGAGTCCGTCAGATGTTCTTCCCTGCAACCGTTCCAGCTTACTACCGAAATCCCCCGGCTGCTTAA 1656 0.4728 MVAVPIHLWSLPEHRTVVSVAVRFLEMLDTYVFGWIICAALSVFVIRNFVFAGKKCCASSETDASMCAENITTAAGECRSSMRDGEFDVIIVGAGVAGSALAYTLGKDGRQVLVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEKIDAQQVFGYALFKDGKHIRLSYPLEKFHSHVAGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEEKGVIKGVQYKTKDSQELSVCAPFTIVCDGCFSNLRRSLCDPKVDVPSCFVGLVLENCELPCANHGHVILGEPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVIAPQVPHELHNAFIAAVDKGSIRTMPNRSMPAAPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLRDLNDAPSLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPARAEMRQACFDYLSLGGQFSEGPVSLLSGLNPRPLTLVLHFFAVATYGVGRLLLPFPSPKRIWIGLRLISSASGIIMPIIKAEGVRQMFFPATVPAYYRNPPAA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00553 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 237 252 - -
Phco7g00553 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 365 380 - -
Phco7g00553 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 88 110 - -
Phco7g00553 551 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 380 396 - -
Phco7g00553 551 PANTHER SQUALENE MONOOXYGENASE 47 549 IPR040125 GO:0004506|GO:0016126
Phco7g00553 551 Gene3D - 81 455 IPR036188 -
Phco7g00553 551 Pfam NAD(P)-binding Rossmann-like domain 91 117 - -
Phco7g00553 551 SUPERFAMILY FAD/NAD(P)-binding domain 86 461 IPR036188 -
Phco7g00553 551 FunFam Squalene monooxygenase 2 81 461 - -
Phco7g00553 551 Pfam Squalene epoxidase 238 510 IPR013698 GO:0004506|GO:0016020|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00553 Phco-Chr7 4091952 4100908 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00553 7 4091952 4100908 Phco7g00553 7 4091952 4100908 ECH
Phco2g00372 2 3142483 3146664 Phco7g00553 7 4091952 4100908 PCT