Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00545 ATGTTGCTCCACGAAGCGGTTCAGTTCCCATGTTCTCCGGTTCACCAGACCATGCTGACCCAAAGTGAAATAGAAGACCTGTTTTCTCTCATAAACAAATCGAGAGACCCGGCCAGCCTGCCGTCCGGTTCGCAGGGATCGAACCGGACGGTTTACTCGTCAGAGGAAAAAAAGGTGAGACGCATGCAATCGAACCGGGAATCAGCCCGAAGGTCCCGCTACAAAAAGAAGAAGCATCTTGAGAACCTCACGAGCCAAATGAACCGGTTGAGAATCCAAAACCGGTTTCTCAAAAACCGAGTCGCTTCAACCATGCACCAACACCTCCTACTATCCCTACATAACGATCATCTTAAATCCGAAGCTATTTCCCTTATGGCCACTCTTTCGGATCTATGTCTAGGAAGAGGAAAACATGGTTACGTACGTGCAGTGTGGTTGGTGAAAGACGCCCCAGCATCAGCGAATGGTGAAAACCATGAATAG 486 0.4897 MLLHEAVQFPCSPVHQTMLTQSEIEDLFSLINKSRDPASLPSGSQGSNRTVYSSEEKKVRRMQSNRESARRSRYKKKKHLENLTSQMNRLRIQNRFLKNRVASTMHQHLLLSLHNDHLKSEAISLMATLSDLCLGRGKHGYVRAVWLVKDAPASANGENHE 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00545 161 MobiDBLite consensus disorder prediction 53 69 - -
Phco7g00545 161 SUPERFAMILY Leucine zipper domain 57 111 IPR046347 GO:0003700|GO:0006355
Phco7g00545 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Phco7g00545 161 Coils Coil 80 100 - -
Phco7g00545 161 FunFam BZIP transcription factor 55 106 - -
Phco7g00545 161 Pfam Basic region leucine zipper 54 102 IPR004827 GO:0003700|GO:0006355
Phco7g00545 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 41 133 - -
Phco7g00545 161 Gene3D - 55 109 - -
Phco7g00545 161 MobiDBLite consensus disorder prediction 35 52 - -
Phco7g00545 161 Coils Coil 52 72 - -
Phco7g00545 161 CDD bZIP_plant_GBF1 58 108 IPR045314 GO:0003700|GO:0006355
Phco7g00545 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 102 IPR004827 GO:0003700|GO:0006355
Phco7g00545 161 SMART brlzneu 53 124 IPR004827 GO:0003700|GO:0006355
Phco7g00545 161 MobiDBLite consensus disorder prediction 35 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00545 Phco-Chr7 4020868 4021751 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco7g00545 bZIP_2 9.1e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00351 2 2906340 2906762 Phco7g00545 7 4020868 4021751 PCT