Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00386 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTGAATCTGAAGGTGCTTAAGGTTCCAGAAATCGAACAGAAGGTGCTCGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGCACTGGCAGAGATTTCCCAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGACTGGGCGAAACTGGAAAAGACTGGAGATATGTATACAAGGCGTTAGCAGTTATAGAGTATTTGGTAGCACATGGATCTGAACGTGCAGTTGACGACATTATAGAACATACTTTTCAGATTTCAGCACTTTCTAGTTTTGAATATGTTGAGCCGAGTGGGAAGGACGTAGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCCCTTTTGAATGATAGAGATAAGATACATGATGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTACATTGGAGTTTCTTCTAGTGGTATTACATACAAGTCTGGTGGGTCCTCCTCTTATAGTAGTGGCGGCAGCTTTCAGAGCAGTGGTAAGTATGGAGGCTTTGGATCTAGAGATGGTGACAGGTTTGGTGATAACAATAGAGACAAGGGGGGATCCTATGATGAAGATTACCAGGGGAAATCACACCATGCCGTTGCAAGTGACAATCAAGACAACTCCTTCAAGAAGAGTTCTTCACGCTCTGTCAGCAAAAGTCAGGAGAACAAGTCATCTAGAGTATCAAAGTCATCAACTAAAGCAAATAATTACGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGCAAACAATACTGAGGATGAAATGGATGATTTTGATCCAAGAGGAACCTCTACTAAAACTTCAGCAGGAAACTCTAACCAAGTTGATCTCTTTGGACAAGATTTAATTGGTGATTTCATGGATGCTCCAACATCTGTTCCTGTAGAGAAGCCAGCAACTGGTAATTTGCCAGAGGTTGATCTTTTTGCAGATGCATCATTTGTATCAGCAACACCTCAAATGGACCAAGGAGCCAGTTCTCAACCACAGGCTGAGGTGGATCTATTTGCTTCACAACCAGCCATTTCTACAGTTACACCAACAGTTGACTTGTTTTCCATTCCTGAACCGGTAGTGCAGCCAGACAGCAAGCCAGAGAAATCTGGTCCTGTGAATAACAGCTCGTTTGATCCCTTTGCTGCTGTTCCTCTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCTGTGTCTTCCCAGCCCTCGGATAAAGTTGTCAGTGATGACAAACATGATAATATCACTGGTAAATCTTTAGCAGACTCTAAAGTTTTACCTAAAAAGGATACTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGCCGCGGACTGATTGATCTCAATATAACTGCCCCTAAAAAAGTATCCCTTGTGGATGTTGGGATTGTGGGTGGCTTGAGCGATGGATCTGACGAAAAGGAGAAAGGCCCTCCACCTTCATTTTTTATGGGGAGAGCTATGGGTTCAGGTTCTGGTCTTGGACTTGGTAGGTCTGGATTCTCTCCTTCACCACCAGCACCCGGAGACGACATTTTCTCAAACCTTGGTACCCAACAATATCAATTTGGTGGGTTCCAAAAGTAA 1692 0.4261 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEISQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVAHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDRDKIHDVRNKAAANRDKYIGVSSSGITYKSGGSSSYSSGGSFQSSGKYGGFGSRDGDRFGDNNRDKGGSYDEDYQGKSHHAVASDNQDNSFKKSSSRSVSKSQENKSSRVSKSSTKANNYGSVPSQSSSVPANNTEDEMDDFDPRGTSTKTSAGNSNQVDLFGQDLIGDFMDAPTSVPVEKPATGNLPEVDLFADASFVSATPQMDQGASSQPQAEVDLFASQPAISTVTPTVDLFSIPEPVVQPDSKPEKSGPVNNSSFDPFAAVPLNNFDGSDIFGDFTSQSDSVSSQPSDKVVSDDKHDNITGKSLADSKVLPKKDTFQVKSGVWADSLSRGLIDLNITAPKKVSLVDVGIVGGLSDGSDEKEKGPPPSFFMGRAMGSGSGLGLGRSGFSPSPPAPGDDIFSNLGTQQYQFGGFQK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00386 563 FunFam Clathrin interactor 1 18 165 - -
Phco2g00386 563 SMART enth_2 26 152 IPR013809 -
Phco2g00386 563 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Phco2g00386 563 MobiDBLite consensus disorder prediction 224 279 - -
Phco2g00386 563 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Phco2g00386 563 MobiDBLite consensus disorder prediction 201 223 - -
Phco2g00386 563 PANTHER EPSIN/ENT-RELATED 4 541 - -
Phco2g00386 563 MobiDBLite consensus disorder prediction 174 303 - -
Phco2g00386 563 MobiDBLite consensus disorder prediction 426 452 - -
Phco2g00386 563 MobiDBLite consensus disorder prediction 502 551 - -
Phco2g00386 563 CDD ENTH 28 144 - -
Phco2g00386 563 Gene3D - 19 165 IPR008942 -
Phco2g00386 563 Pfam ENTH domain 27 147 IPR013809 -
Phco2g00386 563 MobiDBLite consensus disorder prediction 174 192 - -
Phco2g00386 563 MobiDBLite consensus disorder prediction 438 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00386 Phco-Chr2 3331408 3338167 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00386 2 3331408 3338167 Phco2g00386 2 3331408 3338167 ECH