Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00384 ATGACAGTTCCTCTTTCTCAGTGTCGCGAGTTCCCTCTTCCCGACATAGCTCTCGTCGCCGGCGACGAAACCCTTGACGCCGTCTTGAAACTCTTCAAGACCAAGCTTCCGACGCTGACGAAACCCTATTGTAAAGCCGGTCCGAAGCTTTCAATCGAGATGTTGAATCATGTGAGGAATAATAATAATAGCTGCTCATGGCTGTTGTTTGTAGTGAGGCACTACTCTAGAATTCAACCCCCAAGGCCTGTTTCTGTTGAACCAGTAATCAGAGTATCTAACAATATTGCTCGCCTGGATGCTCCTAAAGATGGTCCAAAACCCAGACAACTGTTATCATTGCCTCCTTTTCCTGGTCACCCCTTGCCTGCCAAGAGCTCAAATAGTGATCCTGGACAGCGTGATTATGTTACTGCTGTCAATTGGATTAAGTATTACTTCAAGGGTACATGGGGTTCTGTCATTGAATCCCATTTCAGAGAGGGTCTTGTGCAAATGGAGGGCGTAGTTACTGCTGACTCTTACACTCAGAAAGAAAATCTGATGAAACCTATGCGAAAGATTAGACCTAATGAAGTGATGAAACATGGTGCCAGAGTTCACGTTCCTGTATCAATTGCTGAGACTAGGATTTCCAAAAGATATGATGCTATTCCTAGTGGAACACTATATCCAAATGCTGATGAAATTAAATATCTGCAAAGGCTTGTGATTTACAAGGACTCAGCTATTATTGTGCTTAATAAACCTCCAAAGTTGCCGGTTAAGGGGAATTTACCAGTTCATAATAGCATGGATGCATTGGCAGCTGCTGCACTGTCCTATGATTATGATGAGGGCCCTAAACTAGTTCACCGTCTTGACAAAGAGACCAGTGGCATCCTTTTACTGGGGAGAACTAAAGATAGTGCATCTCATCTCCAATGGTTGTTCACTAACATTAACAATGCTAAATCTTCTTGTAAGGCTTGGAATGATGCATGTGAAGCTACGTATCAGAGGTATTGGGCATTGGTCATAGGGACTCCCAAGGAGAAGGAAGGCATAATTCATGCTCCTATTTCTAAGGTTCTTCTAAACGATGGGAAGACTGAGAGGATAATACTAGCTAACCATTCGAGTGTAGAACCACGCCAAGAGGCTGTAACCGAATTTCGGGTGCTTGGTCCGAAGATAAATGGATGCTCATGGGTTGAGCTACGTCCACTTACTTACAGAAAACATCAGTTGCGCGTTCATTGCGCTGAAGCACTTGGCACACCAATAGTGGGTGACTACAAGTATGGCTGGTTTGTGCACAGCCGATGGAAGCAAATGCCACGAATCGATATCGAGCCAACAACTGGAAAACCATACAAGTTGCGTAGGCCAGAAGGCCTAGAAGTTCAGAAGGGAAGTGTTTTATCGAAGGTTCCCCTATTGCATCTTCACTGCAGAGAACTTGTGCTCCCCAACATTGCTAAGTTTCTACATGTTTTGAACAATAGTTCAGAAGAACTACACAGTTCACTTGGCCAGCAGCCTGAAGTTCTACGATTTGTGGCAACAATGCCATCCCATATGAGAATTAGTTGGAATCTTATGTCATCTCGACTCTCTGGTCCTCCCAAATCAGAATCTCCCGAAACCATGAAACGCAGCGTTTTTCATCCAATGACAAATTTCATAGTCAAGGTACAAACGCAGCGTTTCTCACAGCAGCACCACCTCCTAATCGTACGAACCGCTCCTTTTCTCGTTGGACCGAACCGGAGACACAGAAACAACAACTATTTCATTTTGGTTTAG 1788 0.4424 MTVPLSQCREFPLPDIALVAGDETLDAVLKLFKTKLPTLTKPYCKAGPKLSIEMLNHVRNNNNSCSWLLFVVRHYSRIQPPRPVSVEPVIRVSNNIARLDAPKDGPKPRQLLSLPPFPGHPLPAKSSNSDPGQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEGVVTADSYTQKENLMKPMRKIRPNEVMKHGARVHVPVSIAETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDKETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPISKVLLNDGKTERIILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLEVQKGSVLSKVPLLHLHCRELVLPNIAKFLHVLNNSSEELHSSLGQQPEVLRFVATMPSHMRISWNLMSSRLSGPPKSESPETMKRSVFHPMTNFIVKVQTQRFSQQHHLLIVRTAPFLVGPNRRHRNNNYFILV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00384 595 Gene3D Pseudouridine synthase 228 491 - -
Phco2g00384 595 Pfam RNA pseudouridylate synthase 244 415 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Phco2g00384 595 CDD PseudoU_synth_RluA_like 244 440 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Phco2g00384 595 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 138 530 - -
Phco2g00384 595 MobiDBLite consensus disorder prediction 99 132 - -
Phco2g00384 595 ProSitePatterns Rlu family of pseudouridine synthase signature. 284 298 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Phco2g00384 595 SUPERFAMILY Pseudouridine synthase 229 486 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00384 Phco-Chr2 3306902 3317754 Dispersed