Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00372 ATGGTGGATCCGTACGTTCTCGGCTGGATTCTGTGCTCCGTTCTGACTCTCTTCGCGCTCTACAGCCTTGCCTTCAGCGGAGAGAGCCGGCGTCGAGCTTCGCCGAAGGGGGAGAAGAGCATCGAGCTTTCGGAAACCGTGACCACCTCCACGAGTGAATGCAGATCGGAGAAACGCGACGCCGACGTTGACGTCATTATTGTCGGAGCCGGTGTAGCCGGCGCAGCTCTAGCGCACACTCTCGGAAAGGATGGGCGTCGAGTACACGTCATTGAAAGAGATCTGAGTGAGCCTGATCGTATTGTTGGAGAATTGCTACAACCAGGTGGCTATCTCAAATTGATTGAGCTGGGGCTTGAAGACTGTGTAGACAAAATTGATGCTCAACAAGTGTTTGGTTATGCTCTTTTTAAGGATGGGAAACATACACGTCTCTCTTACCCCTTGGAGAAGTTTCACTCAGATATCTCTGGCAGGAGCTTTCACAATGGTCGCTTCATTCAGAGGATGCGGGAAAAGGCTTCCACCCTTCCCAATGTGCGATTAGAGCAAGGAACAGTCACTTCCCTTGTTGAAGAGCAGGGGACAATTAAAGGTGTGCAATATAAGAACAAAGATGGCCAGGAATTGACAACATTTGCACCTCTTACCATGGTTTGTGATGGCTGCTTTTCAAACTTACGCCGTTCTCTTTGTAATCCAAAGGTTGATGTTCCCTCGAGTTTTGTTGGTTTAGTTTTAGAGAACTGTGAGCTTCCATGTGAAAATCATGGCCACGTTATACTGGGAGACCCTTCACCAATTCTATTCTATCGTATAAGTAGTACAGAAATTCGCTGTCTGGTCGATGTACCTGGTAAGAAGGTTCCTTCTATTTCAAACGGTGAAATGGAAAAGTATTTGAAGACAACAGTAGCTCCCCAGATTCCCCCTGAACTTTATGATGCCTTCATAGCTGCTGTGGACAAGGGCAACATAAGGACAATGCCAAACAGAAGCATGCCGGCAGATCCTCTTCCTACACCTGGAGCCCTTCTGATGGGAGATGCATTCAACATGCGGCATCCACTAACTGGAGGCGGAATGACTGTGGCATTGTCTGATATTGTGGTGCTGAGAAATCTTTTAAGGCCCTTGCCTGATCTGAATGATGCACCCACACTCTGCAAGTACCTCGAATCCTTTTATACCTTGCGTAAGCCTGTGGCATCCACAATAAATACATTGGCAGGTGCTCTTTACAAAGTTTTTTGTGCATCTCCTGATCAGGCAAGGAAGGAAATGCGCCAAGCTTGCTTTGATTATCTAAGCCTTGGAGGCCTATTCTCCGAAGGACCAGTTTCTTTACTTTCTGGATTAAACCCTCGTCCCTTGAGTTTGGTTCTCCATTTCTTTGCTGTTGCAATATATGGTGTTGGCCGTTTATTGTTACCGTTTCCTTCACCTAAGAGAATATGGATTGGGGCCCGACTAATCTCTGGTGCTTCTGGAATCATCTTCCCCATAATTAAGGCGGAAGGGATTCGTCAAATGTTTTTCCCTGTGACTGTTCCAGCTTATTACAGAACTCCCCCGGTTGGACAGTAG 1587 0.4713 MVDPYVLGWILCSVLTLFALYSLAFSGESRRRASPKGEKSIELSETVTTSTSECRSEKRDADVDVIIVGAGVAGAALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVDKIDAQQVFGYALFKDGKHTRLSYPLEKFHSDISGRSFHNGRFIQRMREKASTLPNVRLEQGTVTSLVEEQGTIKGVQYKNKDGQELTTFAPLTMVCDGCFSNLRRSLCNPKVDVPSSFVGLVLENCELPCENHGHVILGDPSPILFYRISSTEIRCLVDVPGKKVPSISNGEMEKYLKTTVAPQIPPELYDAFIAAVDKGNIRTMPNRSMPADPLPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLPDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRIWIGARLISGASGIIFPIIKAEGIRQMFFPVTVPAYYRTPPVGQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00372 528 SUPERFAMILY FAD/NAD(P)-binding domain 62 437 IPR036188 -
Phco2g00372 528 FunFam Squalene monooxygenase 2 57 437 - -
Phco2g00372 528 Pfam Squalene epoxidase 213 486 IPR013698 GO:0004506|GO:0016020|GO:0050660
Phco2g00372 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Phco2g00372 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 64 86 - -
Phco2g00372 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 356 - -
Phco2g00372 528 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 356 372 - -
Phco2g00372 528 Pfam NAD(P)-binding Rossmann-like domain 67 93 - -
Phco2g00372 528 Gene3D - 56 436 IPR036188 -
Phco2g00372 528 PANTHER SQUALENE MONOOXYGENASE 12 525 IPR040125 GO:0004506|GO:0016126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00372 Phco-Chr2 3142483 3146664 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00372 2 3142483 3146664 Phco2g00372 2 3142483 3146664 ECH
Phco2g00372 2 3142483 3146664 Phco7g00553 7 4091952 4100908 PCT