Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00360 ATGGCGGTTTCTTCTCTCTCTGTTACTCCTCTTTCTCTCTCCAATTCTTCTCCCTCTCTATCTTCCAAGCTAAAGTCTCCATTTTTGTGCCTTTTCTCGGGTAACTCCTTGAGGGTCACATGCCCCAAACCTCTGCACTCATCAACTGTGGTTCATGTTGCTCCGGAAGTGTTGGATTCTTCCCCTGATCCCTTGGACCCACCTCCAGAAACCCTTGACGATGACTCTGAATCCACCACTTATCAGGTTGGTGACTTGGGAACTCCGAGCACTTCGGCAATTAGCATTGGTGCTGATGCAGATGCAATGGCACCAAAGCAGAAGATTAGAATCAAGCTTAGATCTTACTGGGTGCCCTTGATAGAGGATTCCTGCAAGCAGATATTAGATGCAGCAAGAACTACCAATGCAAAAACGATGGGACCTGTGCCATTGCCAACCAAGAGGCGAGTCTACTGTGTTCTTAAATCCCCTCACGTACACAAGGATGCTCGGTTCCATTTCGAGATCAGAACTCACCAGCGTCTCATTGATATTATGTATCCTACTGCTCAAACAATAGATTCTCTTATGCAACTAGATCTTCCTGCTGGTGTTGATGTGGAGGTCAAGCTCTAG 618 0.4676 MAVSSLSVTPLSLSNSSPSLSSKLKSPFLCLFSGNSLRVTCPKPLHSSTVVHVAPEVLDSSPDPLDPPPETLDDDSESTTYQVGDLGTPSTSAISIGADADAMAPKQKIRIKLRSYWVPLIEDSCKQILDAARTTNAKTMGPVPLPTKRRVYCVLKSPHVHKDARFHFEIRTHQRLIDIMYPTAQTIDSLMQLDLPAGVDVEVKL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00360 205 Gene3D Ribosomal protein S10 domain 97 205 IPR036838 -
Phco2g00360 205 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 42 205 IPR001848 GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 SUPERFAMILY Ribosomal protein S10 108 205 IPR036838 -
Phco2g00360 205 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g00360 205 MobiDBLite consensus disorder prediction 56 84 - -
Phco2g00360 205 Pfam Ribosomal protein S10p/S20e 110 204 IPR027486 -
Phco2g00360 205 NCBIfam 30S ribosomal protein S10 107 204 IPR001848 GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 PRINTS Ribosomal protein S10 family signature 164 178 IPR001848 GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 PRINTS Ribosomal protein S10 family signature 108 121 IPR001848 GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 PRINTS Ribosomal protein S10 family signature 143 158 IPR001848 GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 Hamap 30S ribosomal protein S10 [rpsJ]. 106 205 IPR001848 GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 ProSitePatterns Ribosomal protein S10 signature. 132 147 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Phco2g00360 205 SMART Ribosomal_S10_2 110 204 IPR027486 -
Phco2g00360 205 FunFam 30S ribosomal protein S10 103 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00360 Phco-Chr2 2976018 2980293 Dispersed