Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00357 ATGAAATCAGACGCCTCTGAAATTCCTTACTTGTTGATTCGCATTTGGAATATGTCTTCGTCGGTGGATCTTCCTCCTAAGGGTGGCTTCAATTTTGATCTATGTCGAAGAAATGCAATGCTTGAAAACAAGGGTCTCAAGGCCCCAACCTTTTTGAAAACTGGCACCACTATAGTCGGTTTAGTTTTTCAGGATGGTGTCATTCTTGGAGCTGATACTAGAGCAACTGAAGGGCCTATAGTGGCTGATAAAAACTGTGAGAAAATTCATTATATGGCACCCAACATATATTGCTGTGGAGCTGGCACTGCTGCTGATACAGAGGCTGTAACAGACATGGTTAGTTCACAGCTGCAACTACATCGTTATCACACTGGTAGAGAATCCCGTGTTGTTACAGCTCTGACCCTTCTTAAGAAACACCTATTCAATTATCAAGGTCACGTCTCAGCTGCTTTAGTGCTTGGTGGGGTTGATATCACTGGACCTCATTTGCATACAATTTATCCTCATGGGTCTACTGACACTCTTCCATTTGCAACAATGGGATCAGGTTCACTTGCTGCAATGTCTGTATTTGAGTCCAAGTACAAGGAAAGTTTAAGTAGGGATGAAGGCATAAAGATAGTTGTTGAGGCAATATGTGCTGGTATCTTTAATGACTTGGGAAGTGGAAGTAATGTGGACGTTTGTGTGATAACTAAGGGACACAAGGAATATCTCAGGAACCACCTTCTACCAAATCCACGTACCTATGTCAATCCAAAAGGCTTTGAATTCCCCAAAAAGATAGAGGTCCTCTCGACAAAAATTACCCCGTTGAAGGAGAAGGTTGAAGTGATTGAAGGGGATGCCATGGAAGAGTAA 867 0.4245 MKSDASEIPYLLIRIWNMSSSVDLPPKGGFNFDLCRRNAMLENKGLKAPTFLKTGTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGIKIVVEAICAGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTYVNPKGFEFPKKIEVLSTKITPLKEKVEVIEGDAMEE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00357 288 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 27 247 IPR029055 -
Phco2g00357 288 CDD proteasome_beta_type_7 56 244 - -
Phco2g00357 288 ProSiteProfiles Proteasome beta-type subunit profile. 55 233 IPR023333 -
Phco2g00357 288 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 56 288 IPR029055 -
Phco2g00357 288 FunFam Proteasome subunit beta type-2 56 287 - -
Phco2g00357 288 ProSitePatterns Proteasome beta-type subunits signature. 59 106 IPR016050 GO:0005839|GO:0051603
Phco2g00357 288 PRINTS Proteasome component signature 63 78 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco2g00357 288 PRINTS Proteasome component signature 194 205 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco2g00357 288 PRINTS Proteasome component signature 183 194 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco2g00357 288 PRINTS Proteasome component signature 219 230 IPR000243 GO:0004298|GO:0005839|GO:0051603
Phco2g00357 288 PANTHER METALLOPROTEASE TLDD 52 251 IPR023333 -
Phco2g00357 288 Pfam Proteasome subunit 53 233 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00357 Phco-Chr2 2966904 2970721 Dispersed