Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00344 ATGGTGGTGCTATCGTCGGAGGATGAATTCGACGAGGAGCCCGGCGAGGTCATCGAATCGGCGCCGCCGCAGAAGGTGGGCGAAGAGAGGCAACTCAGAGGTCTCAAGAAGAAGCTTATCAGACACGGACACGGTTGGGAAACCCCCAACTTCAACGACGTCGTAACAGTTCATCGTGTTGGAACATTGCTTGATGGAACGGCGTTGGGTTCTTCCACTAGGACGGATCAACCCTTGACGTTCACTCTTGGTAATGGTGACGTTCCTGGGTTGGACTGTGGGATTACGAGTATGAAGAAAGGGGAGGTAGCATTGTTCACATTACCTGCAGATGGTGAAGGTGATGTTAGGCGTGATTCCAACTCGGTTCTGCAGTTTGAGGTGGAACTTCTTTCGTGGATCAGAGTGGTGGATGTGTGCAAAGATGGTGGAGTTCTCAAGAAAATTATGGAGAAGGGGAGTGGGAATGACCGCCCTGCTGATCTCGACGAAGTGCTTGTGAAGTATCGGGTGGCACTAGTTGATGGCTCTGTTGTTGAAGAGACACCTGAAGGAGGAGTTGAGTTTTACGTGAAGGATGGTCATCTTTTTCCGATTTTGCCGAAAGTGATCATGACTATGACGAGGGGAGAGAAGGCTGAATTAATTGTCCAACCTCAGTATGCCTTTGGGGAGACTGGAAGAGAAGCTGGAAGTGGGCTCTCTTCTATCCCTCCAAATTCAGTACTGCATGTTAATATTGAATTGGTGTCCTTCAAGTCTGTCATAAATGTTACCGGTGACTCCAAGGTGCTTAAAAAGATTTTGAAAGAAGGGGAGGGTGCTTTCACAGCCAATGAGGGTGCAAAAGTTACTGTCAGCTTCACAGCTATGCTAGAAGATGGCACTGTATTTGAGAAAAGGAGAACTGGTGAAGAACAACCCTTGGAATTCATAACCGATGAGGAACAAGTGATTGCTGGTCTAGATCGAGCAGTGGCTACTATGAAGAAGGGGGAGAGGGCCATTATTTCCATACATCCTGAGTATGCATTTGGAAATGTTGAAGTGAGACAAGATCTTGCTATTGTTCCATCAGGCTCGAATGTAGTCTATGACGTTGAGATGATGAATTTTATCAAGGAGAAAGCACCATGGGAATTGAATAATAAGGAGAAAATTGAGGTGGCTGAGAGGAAGAAAGAAGAAGGAAATGTACTATTTAAAGGTGACAATTACCTGCGAGCAGAGAAGAAGTATGAACAGGCGGTTGATTTTCTTAGTGACGATGGATCCTTTGGGTTTGGTGAGCAAAAGCAAGCTGACGCACTGAGAGTGTCATGCTGGTTGAATGGTGCAGCTTGTAGCCTTAAACTTAATGACTTTCGTGGAGCAATCAAGCTATGTTCACAGGTGCTTGATGTTGAATTTTGCAACATGAAGGCTTTGTACAGACGAGCACAAGCATATATAGAAACTGGAGACTTCCTATTAGCAGATGTAGACATCAAGAAAGCTCTTCTGGTGGACCCACAAAACTGGGAGGTAAAGGTAATACAAAAGAAATTGAAACAACTTCAAGCTGACAAAGACAAAAAAGATGCTAAGCTGTTCGAAAACATATTTGCGTGTAAAACGAAGGACTCTTCTATGGCTATAAAGAGATTGAAGGTTGAGAAAGACGAGAGGGAAAACGAAGATGATGCGAGAATGGAAGAGGATACGGTTGCTGATAGCGTAGTGATTTAA 1728 0.4497 MVVLSSEDEFDEEPGEVIESAPPQKVGEERQLRGLKKKLIRHGHGWETPNFNDVVTVHRVGTLLDGTALGSSTRTDQPLTFTLGNGDVPGLDCGITSMKKGEVALFTLPADGEGDVRRDSNSVLQFEVELLSWIRVVDVCKDGGVLKKIMEKGSGNDRPADLDEVLVKYRVALVDGSVVEETPEGGVEFYVKDGHLFPILPKVIMTMTRGEKAELIVQPQYAFGETGREAGSGLSSIPPNSVLHVNIELVSFKSVINVTGDSKVLKKILKEGEGAFTANEGAKVTVSFTAMLEDGTVFEKRRTGEEQPLEFITDEEQVIAGLDRAVATMKKGERAIISIHPEYAFGNVEVRQDLAIVPSGSNVVYDVEMMNFIKEKAPWELNNKEKIEVAERKKEEGNVLFKGDNYLRAEKKYEQAVDFLSDDGSFGFGEQKQADALRVSCWLNGAACSLKLNDFRGAIKLCSQVLDVEFCNMKALYRRAQAYIETGDFLLADVDIKKALLVDPQNWEVKVIQKKLKQLQADKDKKDAKLFENIFACKTKDSSMAIKRLKVEKDERENEDDARMEEDTVADSVVI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00344 575 Gene3D - 137 253 IPR046357 GO:0003755
Phco2g00344 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 131 IPR001179 GO:0003755
Phco2g00344 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 277 369 IPR001179 GO:0003755
Phco2g00344 575 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 159 250 IPR001179 GO:0003755
Phco2g00344 575 SUPERFAMILY TPR-like 383 532 IPR011990 GO:0005515
Phco2g00344 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 281 373 IPR001179 GO:0003755
Phco2g00344 575 SMART tpr_5 473 506 IPR019734 GO:0005515
Phco2g00344 575 SMART tpr_5 439 472 IPR019734 GO:0005515
Phco2g00344 575 SMART tpr_5 390 423 IPR019734 GO:0005515
Phco2g00344 575 SUPERFAMILY FKBP-like 138 253 - -
Phco2g00344 575 Gene3D - 28 136 IPR046357 GO:0003755
Phco2g00344 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 134 IPR001179 GO:0003755
Phco2g00344 575 FunFam Peptidylprolyl isomerase 137 253 - -
Phco2g00344 575 Gene3D Tetratricopeptide repeat domain 376 533 IPR011990 GO:0005515
Phco2g00344 575 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 162 253 IPR001179 GO:0003755
Phco2g00344 575 FunFam Peptidylprolyl isomerase 378 533 - -
Phco2g00344 575 Coils Coil 509 529 - -
Phco2g00344 575 FunFam Peptidylprolyl isomerase 254 375 - -
Phco2g00344 575 ProSiteProfiles TPR repeat profile. 473 506 IPR019734 GO:0005515
Phco2g00344 575 PANTHER PEPTIDYLPROLYL ISOMERASE 136 253 - -
Phco2g00344 575 SUPERFAMILY FKBP-like 259 392 - -
Phco2g00344 575 Gene3D - 254 375 IPR046357 GO:0003755
Phco2g00344 575 SUPERFAMILY FKBP-like 8 135 - -
Phco2g00344 575 MobiDBLite consensus disorder prediction 552 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00344 Phco-Chr2 2845786 2852059 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00344 2 2845786 2852059 Phco2g00344 2 2845786 2852059 ECH