Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00343 ATGGTCGAAACCTACAGGGTAAGGTCCGTCGATTGGAGACCTTCGCCGGTGGTGGCGCTAGCCACCACCATCGACGGCGCGCGAGTTGCTGCCGCTCGCCAAGATGGCTCGCTCGAAATCTGGCTCGTTTCTCCCGGCGCCATCGGTTGGCACTGTCAGCTGACTATTCACGGAAACCCTAACGGAAGAGTGACGTCGCTTATTTGGTGCCCTGGCGGTGTCGACGGAAGCCGTTTGTTTTCGTCCAACGTGGATGGCACGGTTTCTAGGTGGGATCTTTTCCACTTGAAGCAGGAGACGGTGATGAAATCGGAAGTCTCAATCTGGCAAATGGCGATGAAGTTTCCTATAGATGATAAGGTGAATGATGAAAATAAGGATGAACGAGTGGGGAACGAAAATGGGAACGGTTTCCATGATTTTGTTGAACGTGAGAGCAGTGATAGTGATGATGATTCTCATTCGCCTGGTCCTCTTGAGCGTTCTTATAGGGAGCTCCCACGTGTGGCGATTGGTTTTAATGATGGAAGATTGAGAATCTATGAAATCTCTGACACTGATGAATTTATTCTTGTAAAATCTTTGCCCCCCGTCACAGGACGAATTTTAAGTGTGACTTGGAGCCAGGATGCTAACTACATATATTCAGGAAGCAGTGATGGTTTGATACGTTGCTGGAATGCTACATTGGGCAATGAAGTCTACAGGATTACAGCTGGACTTGGAGGGTTGGGCAGTGGGCAGGAACTTTGCATATGGTCATTACTTTCTTTAAGGAATGGTACACTTGTCAGTGCGGACAGCAGTGGTAGTGTTCAGTTTTGGGACAGCCGTCATGGAACTCTCTTGCAAGCACATTCTTTACATAAGGGACATGTATTTGCTCTGGCAGCAGCTCCTAGTCATAATAGGGTGTTTTCTGCTGGTTCTGATGGTCAGGTTATTCTTTACAAGCTTTCTGATAGTCAGGCAGCATCAGCTGATGATATCAACTATTCTTCAATGACAAAGAGATGGATTTATATTCACCATGTAAGGTCTCATACACACGACATCAGAGCCCTTTCTGTCGCTGTACCGATAAGTTGTGAAGCTGATATTAACCCAGAAAAGAGGATTAAAAGAATTCGAGGAGAAAGAAAGCCCACCGATTTTAGTTACCATAAGTGGGCTCATTTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAACTTTTTGCATACCCAGTTAAAGAATTCACCAAGTTTCCTCCTCATGACATCTGTCCTGCACCCCAGAGGACACCCATTCAACTAGTGCTCAACTCTATTTTTAATCAATCGAAAATCCTTTTAGTCCAATCTTCAAAGCACATAGATGTTCATTTGCTACCGCATAAAAATGTTTCCACCCCTGGGGGACTTACTAAGACTGAAATAGTTGCTCGAGTCAAGAGTAAGGCATCTCGGAAGATAATTTGCAGCTCTATTTCTAATTCAGGGGCGCTAATTGCATACTCTGATCATAAAAGGCCTAGTCTTTTGGAATTGAAAAGGTGTGAAGTTGGAAAAATCACATGGGATGTTGATAGAAGGGAGCTTCCTCAGAGATTACCATTTGCCCACTCTATGGTTTTTTCTCATGACTCTTCCAAGTTGATAGTAGCAGGTTGCGACCGAAGGATATATGTTGTGGATATTGGGAAAGGTGAATTAGTGCATACTTTTACACCCCGTCGTGAGCCTCAAGATGAGGAATTGCCTCCAACTGAACCACCGATAACAAGATTGTTTTCTAGTTCTGATGGGCAGTGGTTGGCAGCTGTGAACTGTTTTGGAGATATATATGTATTTAACCTGGAGATACAAAGCCAGCACTGGTTCATTTCAAGATTAGATGGCGCCTCTGTTACAGCTGGTGGATTTCCTCCCCAGAATGACAACGTTCTGATAGTTACAACTTCCTCAAATCAAGTGTATGCACTTGACGTAGAGGCCAAGCAGTTAGGAGAATGGTCAAAACGACATACTTTTGCTCTTCCTAGAAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTCCCTCCAGTGGAAGCTTCATCTTCTCCAACGGCAATATCATCTTCGGTTGTTGTTTACAGCTCCAGGGCAATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGATGAAGGTGATATGCTTAACACTCAAGATTCAAGGGCTGGGAATTTACAATATTTTAGTGTTACGAAGGGGACTAAACATAGTAAGAGGAAGTTTGAAGTTTTACCAATAGAGAAACCTGTTAGGAGGAACTTTCATGTTCTACCATTAGAGAATCCTGTTTTATTTTTAGCTCATACTTCAAAAAATTCCTTATTTATAGTAGACAAACCCTGGTTGCAAGTGGTCAAGAGTTTAGAAGCCCCACCAGTCCACAGACATATATATGGGACATGA 2454 0.4393 MVETYRVRSVDWRPSPVVALATTIDGARVAAARQDGSLEIWLVSPGAIGWHCQLTIHGNPNGRVTSLIWCPGGVDGSRLFSSNVDGTVSRWDLFHLKQETVMKSEVSIWQMAMKFPIDDKVNDENKDERVGNENGNGFHDFVERESSDSDDDSHSPGPLERSYRELPRVAIGFNDGRLRIYEISDTDEFILVKSLPPVTGRILSVTWSQDANYIYSGSSDGLIRCWNATLGNEVYRITAGLGGLGSGQELCIWSLLSLRNGTLVSADSSGSVQFWDSRHGTLLQAHSLHKGHVFALAAAPSHNRVFSAGSDGQVILYKLSDSQAASADDINYSSMTKRWIYIHHVRSHTHDIRALSVAVPISCEADINPEKRIKRIRGERKPTDFSYHKWAHLGVPMLISAGDDTKLFAYPVKEFTKFPPHDICPAPQRTPIQLVLNSIFNQSKILLVQSSKHIDVHLLPHKNVSTPGGLTKTEIVARVKSKASRKIICSSISNSGALIAYSDHKRPSLLELKRCEVGKITWDVDRRELPQRLPFAHSMVFSHDSSKLIVAGCDRRIYVVDIGKGELVHTFTPRREPQDEELPPTEPPITRLFSSSDGQWLAAVNCFGDIYVFNLEIQSQHWFISRLDGASVTAGGFPPQNDNVLIVTTSSNQVYALDVEAKQLGEWSKRHTFALPRRYQEFPGEVIGLSFPPVEASSSPTAISSSVVVYSSRAMCLIDFGLPVEQDEGDMLNTQDSRAGNLQYFSVTKGTKHSKRKFEVLPIEKPVRRNFHVLPLENPVLFLAHTSKNSLFIVDKPWLQVVKSLEAPPVHRHIYGT 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00343 817 SMART WD40_4 49 92 IPR001680 GO:0005515
Phco2g00343 817 SMART WD40_4 279 318 IPR001680 GO:0005515
Phco2g00343 817 SMART WD40_4 3 42 IPR001680 GO:0005515
Phco2g00343 817 SMART WD40_4 188 227 IPR001680 GO:0005515
Phco2g00343 817 SMART WD40_4 238 276 IPR001680 GO:0005515
Phco2g00343 817 SMART WD40_4 564 614 IPR001680 GO:0005515
Phco2g00343 817 SMART WD40_4 526 561 IPR001680 GO:0005515
Phco2g00343 817 SUPERFAMILY WD40 repeat-like 390 693 IPR036322 GO:0005515
Phco2g00343 817 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 817 IPR044622 GO:0010073|GO:0035266
Phco2g00343 817 ProSiteProfiles Trp-Asp (WD) repeats profile. 195 236 IPR001680 GO:0005515
Phco2g00343 817 ProSiteProfiles Trp-Asp (WD) repeats profile. 286 327 IPR001680 GO:0005515
Phco2g00343 817 Pfam WD domain, G-beta repeat 202 227 IPR001680 GO:0005515
Phco2g00343 817 Gene3D - 2 149 IPR015943 GO:0005515
Phco2g00343 817 SUPERFAMILY WD40 repeat-like 15 615 IPR036322 GO:0005515
Phco2g00343 817 Gene3D - 162 436 IPR015943 GO:0005515
Phco2g00343 817 Gene3D - 461 694 IPR015943 GO:0005515
Phco2g00343 817 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 195 227 - -
Phco2g00343 817 MobiDBLite consensus disorder prediction 120 160 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00343 2 2835452 2843248 Phco2g00343 2 2835452 2843248 ECH