Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01137 ATGGGCATGAAGAGCACTGGGGGAGAGATTGTTCAAGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGTAAGGTTTACACTGCAAAGGGTCCTCGTGATCGCAGAGTTAGGCTCTCAGCGCACACAGCAATTCAGTTCTACGATGTTCAGGACCGTTTAGGGTATGACAGACCGAGCAAGGCCGTGGACTGGCTCATCAAGAAGGCCAAGAATGCCATTGACAAGCTCGCTGAGCTTCCTCCATGGCACCCTACTGCCAACGCTGCAGATGCAGAGAACAACCATAACCATGCAGGGTCTGGTGACATGGCCATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTGCAAAGGCAATTAGGTGAGGACCATGATAACCACCATTCAGCTTTCATTCCTTCACCTATTGACACTGATGCAATAGCCTTTTTTCCCACAACCACTGCCCCCTCCTCCATCAATTTCCAAACCTACCCTCCTGACATAATCTCAAGAACCAACAACTCCAGTGAGGATCTTGGCCTTTCTCTTCACTCCTTCCAAGACCCGGGCCTGATTCATGGCCAGTCCCAAGCAGGTGCAAACCAATCACAAACACCTTCCAATCACCAAACCCTCTTTTCTGGCTCAACTCAAATGGGGTTTGAAGCCAATTACCCCAGGATTGTGACTTGGAACAATGATACAGGCACAGATATGAACAGAACCGGGTTCATGGTAAACTCACCAGCTCTTCTAGGCCAAGGTGGTTCTGCTGCATATTCCCAGAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGACATTCCCATGGCTTCTTCCGCAGAACATCACAAGACACAACCAATTCAACAGGCTTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGAATTCAAGGCGAGGACGGGAGTCATGGTGTTAGTCCCGACAAGCCATCATCTTCTTCTCCTAATTCTCATCACCGAGCACAAACGTGA 1044 0.4943 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELPPWHPTANAADAENNHNHAGSGDMAIAEQSESSGYNFQLQRQLGEDHDNHHSAFIPSPIDTDAIAFFPTTTAPSSINFQTYPPDIISRTNNSSEDLGLSLHSFQDPGLIHGQSQAGANQSQTPSNHQTLFSGSTQMGFEANYPRIVTWNNDTGTDMNRTGFMVNSPALLGQGGSAAYSQRGTLQSSFSPSLRPWSDIPMASSAEHHKTQPIQQASIFGSRFLSDALPGFCIPARIQGEDGSHGVSPDKPSSSSPNSHHRAQT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01137 347 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Phco10g01137 347 MobiDBLite consensus disorder prediction 330 347 - -
Phco10g01137 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 281 IPR005333 GO:0003700
Phco10g01137 347 MobiDBLite consensus disorder prediction 318 347 - -
Phco10g01137 347 Pfam TCP family transcription factor 23 117 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01137 Phco-Chr10 33167501 33168544 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco10g01137 TCP 8.7e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01137 10 33167501 33168544 Phco10g01137 10 33167501 33168544 ECH
Phco9g01760 9 41460377 41462085 Phco10g01137 10 33167501 33168544 PCT