Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00478 ATGGGTAAGAAAGCAGTGCTAATAGGATGCAACTATCCAGGAACAAAGGCTGAATTGAGAGGGTGCATTAATGATGTGTGGAGTATGAAGAAGTGCCTCATCAACATATATGGTTTCTCAGAAAAGGACATTGTTGTTCTCATTGATACTCATCATTCCTACACCCAACCCACCGGCAAGAACATCAGATTGGCTCTCTCCAACCTTGTCCGGTCGGCGAAGCCTGGCGACGTCCTCTTCGTCCACTACAGCGGCCATGGCACGCGTCTTCCGGCAGAGTCCGACGACCAAGACAATACTGGCTATGATGAATGCATTGTTCCCACAGATATGAATCTCATCGCTGATGATGATTTCAGACTATTTGTAGACAAGGTCCCAAGGGGTTGTAATATCACAATCGTTTCAGATTGCTGCCACAGTGGTGGCCTTATTGAAGCAGCAAAGGAACAAATAGGAGACAGCACCAACGAAGAAGGCTACTTTTCAAACTCTCCATTTCACTTCAGAAACTTTTTTCATCGAAACATGCAACAACAAGAAGAAGAAACCACTGTGAAGAACCGATCTTTGCCTCTCTCAACTCTCACAGACATACTCCAGCAGAAAAGTGGTAAAAACATAGAAACTGGGAAACTAAGGCATACCCTCTTCCACATCTTTGGTGAAGATGCAAGCCCCAAAGTGAAGAAGTTCTCAGATTTAGTCATGAACAAACTCCAACATGGAAAAAGTGGTGAGAGTGGAGGGCACAGAGTTGGGGGTGTGGGTGATCTTGCTCACAAATTCTTTGAACAGAAACTACATTATGATGGTGATGAGTTAGAAAAACGTGGGGGAAACAGAAAAGGGGAACATGCTGCATCAATCAAGCGCAATGTTCTGGATTGTGGGATTCTGCTGAGTGGTTGCCAGAGCGACCAAACTTCTGCAGATGCATGTCCTGTTGGAAAGTCTGGGTCAGCTTACGGGGCCTTCAGCAATGTGATTAAGGGTATAATTGAAGAGAGTGAAGGGGCAGTGACAAACAGGGATCTTGTGCTGAAGGCTAGGATGATCCTTAAGAAGCAGGGTTTTTCTCAGAAACCTGGTCTGTATTGCAGTGACAACAATGTTAATGCTCCCTTTGTGTGTTGA 1137 0.4512 MGKKAVLIGCNYPGTKAELRGCINDVWSMKKCLINIYGFSEKDIVVLIDTHHSYTQPTGKNIRLALSNLVRSAKPGDVLFVHYSGHGTRLPAESDDQDNTGYDECIVPTDMNLIADDDFRLFVDKVPRGCNITIVSDCCHSGGLIEAAKEQIGDSTNEEGYFSNSPFHFRNFFHRNMQQQEEETTVKNRSLPLSTLTDILQQKSGKNIETGKLRHTLFHIFGEDASPKVKKFSDLVMNKLQHGKSGESGGHRVGGVGDLAHKFFEQKLHYDGDELEKRGGNRKGEHAASIKRNVLDCGILLSGCQSDQTSADACPVGKSGSAYGAFSNVIKGIIEESEGAVTNRDLVLKARMILKKQGFSQKPGLYCSDNNVNAPFVC 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00478 378 Gene3D - 252 377 - -
Phco10g00478 378 Gene3D - 1 220 - -
Phco10g00478 378 PANTHER METACASPASE-4 3 377 - -
Phco10g00478 378 Pfam Caspase domain 3 373 IPR011600 GO:0004197|GO:0006508
Phco10g00478 378 SUPERFAMILY Caspase-like 5 113 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00478 Phco-Chr10 4632607 4635245 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00478 10 4632607 4635245 Phco10g00478 10 4632607 4635245 ECH
Phco10g00478 10 4632607 4635245 Phco9g01975 9 44633407 44638699 PCT