Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04037 ATGAAAGTGCGCGTTGCTGCGGCTGCGGCCGTCACTCTGTTTGCGGCGTGGCTGATTCTCGTCGACGCGCGGTTTGTGGTGGAGAAGAGCAGCATAACCGTTCTTTCGCCGCACAAGATGCGGACTAAACGCGACGGCGCCATCGGTAACTTCGGCCTTCCTGACTACGGAGGATTCATCGTTGGCTCTGTGATGTATCCGGCCAAAGGCTCCCACGGTTGTAAGGTCTTCGACGGAGATAAGCCTTTCAAACTTCAGTCCCATCGTCCTACTATTGTTCTCCTTGATCGTGGAGAGTGTTATTTTGCCTTGAAGGTTTGGCATGCACAATTAGCTGGTGCTGCGGCAGTTTTGGTGACTGACAGCATTGATGAATCTCTTATAACCATGGATTCTCCGGAGGAGAGCTCTGATGCAGATGGATACATAGAGAAGATTGTGATTCCATCAGCTCTGATAGAGAAATCCTTTGGTGATTTGTTGAAGGACGCTTTGAATAACAAAGATGAAGTTTTGCTGAGAATTGACTGGAGAGAGTCAGTACCTCACCCTGATAACAGAGTTGAGTATGAGTTTTGGACCAACAGCAATGATGAATGTGGAGCTCGTTGCGACGAGCAGATGAATTTCGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGTGGTTACACCTTGTTCACTCCACACTACATAACTTGGTTTTGTCCACCGCCCTTCATTCTTAGCAGTCAGTGTAAATCGCAGTGTATAAACCATGGGAGATATTGTGCCCCGGATCCAGAGAAGGATTTTGGAGAGGGATATGAAGGAAAGGATGTGGTGTATGAAAATTTGAGGCAGCTGTGTGTCCATAGGGTTGCCAATGAGAGCAACCGTTCATGGGTCTGGTGGGATTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATACAGCAAAGATTGTGCTGAGGAAGTGATGAAATCATTGGATCTGCCTTTGGAGAAAATTAAAAAATGCATGGGTGATCCTGAAGCGGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACAAGTCCAGATCGGTAGAGGATCTCGGGGTGATATCACCATCTTGCCAACATTGGTTTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACTGCTGTACTGAAGGCTGTATGTTCTGGATTTAAGGAGACTACTGAACCTTCAGTTTGCTTAAGTGGAGATGTTGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGCTGGGAAGACAAAAAAGCTAACATAACTGCTTGCAAGGATACATTCAGGGGAAGAGTTTGCGAGTGCCCTGTTGTGAACGGTGTTCAGTATAAGGGTGATGGTTATACTACTTGTGAAGCTTTTGGACCTGCAAGGTGTTCTATAAACAATGGTGGTTGTTGGTCAGAAACTAAAAAAGGACTAACTTTCTCAGCTTGCTCAGACTCCAAGGCAAATGGCTGTCAATGCCCGGTTGGGTTTATTGGGGATGGTTATAAATGCGAAGATGTTGACGAATGTAAGGAACGAAGTGCTTGTCAGTGTGATGGCTGCAGCTGCAAGAACACTTGGGGTAGTTACGATTGTAAATGCAAGGGAAATCTTCTATATATAAAGGAACAAGACGTCTGTATTGAAAGAAGTGGATCACGATTTGGCCGGTTCCTTGCCTTTGTGGTCATAGCAGTTGTTGTGGGCGCTGGTCTAGCTGGTTACGTGTTCTACAAATATAGGCTCCGGTCTTACATGGACTCCGAGATCATGGCTATCATGTCACAATACATGCCACTGGACCAGCAAAATAATGTAGTTCATGCTGAAGCTCAGCCTTTACGACAAGAAGGCACCGTGTAA 1884 0.4538 MKVRVAAAAAVTLFAAWLILVDARFVVEKSSITVLSPHKMRTKRDGAIGNFGLPDYGGFIVGSVMYPAKGSHGCKVFDGDKPFKLQSHRPTIVLLDRGECYFALKVWHAQLAGAAAVLVTDSIDESLITMDSPEESSDADGYIEKIVIPSALIEKSFGDLLKDALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPPPFILSSQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKRYSKDCAEEVMKSLDLPLEKIKKCMGDPEADVENEVLKNEQQVQIGRGSRGDITILPTLVLNNVQYRGKLERTAVLKAVCSGFKETTEPSVCLSGDVETNECLERNGGCWEDKKANITACKDTFRGRVCECPVVNGVQYKGDGYTTCEAFGPARCSINNGGCWSETKKGLTFSACSDSKANGCQCPVGFIGDGYKCEDVDECKERSACQCDGCSCKNTWGSYDCKCKGNLLYIKEQDVCIERSGSRFGRFLAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAEAQPLRQEGTV* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04037 627 FunFam vacuolar-sorting receptor 1 407 463 - -
Phac9g04037 627 SMART egfca_6 513 555 IPR001881 GO:0005509
Phac9g04037 627 Gene3D Laminin 407 463 - -
Phac9g04037 627 CDD EGF_CA 513 542 - -
Phac9g04037 627 FunFam Vacuolar-sorting receptor 1 22 184 - -
Phac9g04037 627 ProSitePatterns Calcium-binding EGF-like domain signature. 513 539 IPR018097 GO:0005509
Phac9g04037 627 SUPERFAMILY PA domain 91 171 IPR046450 -
Phac9g04037 627 Pfam PA domain 62 161 IPR003137 -
Phac9g04037 627 Gene3D Laminin 468 555 - -
Phac9g04037 627 Gene3D - 22 184 - -
Phac9g04037 627 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 9 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04037 Phac-Chr9 38615724 38622102 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04037 9 38615724 38622102 Phac9g04037 9 38615724 38622102 ECH