Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1439 ATGGCGAGAAAAGCCGTATTGATCGGAATCAACTACCCAGGAACAAAAGCAGAGCTACGAGGATGCGTAAACGACGTATGGAGGATGCACAAATGCTTGATCGAACGTTACGGTTTTTCGGAAGATGACATCACTATTTTGATCGACACGGATTCGTCGTACACGGAGCCGACAGGAAAGAACATAAGACGTGTTCTGTCGGAGCTGGTGAGATCGTCGGAGGATGGTGATGTTCTGTTTGTTCATTATAGTGGACATGGTACTCGTCTTCCTGCTGAAACTGGAGAGGATGATGATACTGGTTTTGATGAATGTATTGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGAATTTGTGGATGGGGTTCCTAGAGGATGTAGGCTGACCATTGTATCTGATTCATGCCATAGTGGTGGTTTGATTGAAGAAGCTAAGGAGCAGATAGGAGAGAGCACAAAGGGAGAAGAGGAACATTCTGGATCCGGCTTTGGATTGTCAGGCTTTCTGCATAGGAAAGTTGAGGATGCCATTGAGTCCAGGGGATTTCATGTCCCTTCAGGATTGCGCAGTCATACTCGCAGGGATGAAGAAACAAATGAAGATAGGGATATTGAACTCCCCCATGGAGTGAAGAATAGGTCTCTGCCACTTTCAACCCTCATTGATATACTTAAGCAGAAAACTGGGAAAGAAGATATAGATGTTGGTCAACTGAGGCCTACACTTTTTGATGTTTTTGGGGAAGATGCTAGTCCTAAAGTGAAGAAGTTTATGAAGGTCATCTTGAACAAGCTCCAACATGGAGGTGGTGAAGGTGGACAAGGTGGGATACTCGGAATGGTGGGTAGTCTTGCCCAAGAATTTCTTAAGCAAAAGCTGAATGATAATGATGAGGGATATGCAAAGCCTGCCATGGAGACAGAAGTGGGAAGTAAGCATGAAGTATATGCTGGATCGTCAAAGCGTGGTCTTCCAAGCGGTGGGATTCTGATGAGCGGCTGTCAGACAGACCAGACTTCAGCAGATGCTTGTCCTTCCGGAAATGCAGCTAATGCATATGGAGCTTTCAGCAATGCAATCCAGGCTATAATTGAGGAGACTGATGGTGCAATTACATACTCAGAACTTATTCTCAAGGCTAGAGAGAAGCTACAGAAAGATGGTTTCACTCAAAAGCCAGGACTCTATTGCAGCGATCACCATGTTGATGATCCTTTCCTGTGCTGA 1239 0.4487 MARKAVLIGINYPGTKAELRGCVNDVWRMHKCLIERYGFSEDDITILIDTDSSYTEPTGKNIRRVLSELVRSSEDGDVLFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMNLITDDDFKEFVDGVPRGCRLTIVSDSCHSGGLIEEAKEQIGESTKGEEEHSGSGFGLSGFLHRKVEDAIESRGFHVPSGLRSHTRRDEETNEDRDIELPHGVKNRSLPLSTLIDILKQKTGKEDIDVGQLRPTLFDVFGEDASPKVKKFMKVILNKLQHGGGEGGQGGILGMVGSLAQEFLKQKLNDNDEGYAKPAMETEVGSKHEVYAGSSKRGLPSGGILMSGCQTDQTSADACPSGNAANAYGAFSNAIQAIIEETDGAITYSELILKAREKLQKDGFTQKPGLYCSDHHVDDPFLC* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1439 412 PANTHER METACASPASE-4 1 412 - -
Mtr8g1439 412 SUPERFAMILY Caspase-like 3 121 IPR029030 -
Mtr8g1439 412 Pfam Caspase domain 3 403 - -
Mtr8g1439 412 PANTHER METACASPASE-5 1 412 - -
Mtr8g1439 412 MobiDBLite consensus disorder prediction 192 208 - -
Mtr8g1439 412 MobiDBLite consensus disorder prediction 186 208 - -
Mtr8g1439 412 Gene3D - 1 177 - -
Mtr8g1439 412 Gene3D - 298 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1439 Mtr-Chr8 17903599 17905681 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1439 8 17903599 17905681 Mtr8g1439 8 17903599 17905681 ECH